| Annotation |
|---|
| Description | jgi|Araly1|921302|scaffold_102583.1 |
| Sequence |
TCTGGTATTA ATTCTTCTGG ATGGCTAGTT CATCTTCTTC ATCTGAGAGA TGGATTGATG GTCTACAGTT CTCTTCCTTG TTATGGCCTC CGCCACGAGA TCCTCAACAA CATAAGGATC AAGTCGTTGC TTATGTCGAA TATTTTGGTC AATTTACATC AGAGCAATTC CCAGATGACA TCGCTGAGTT GGTCCGGCAT CAGTATCCAT CAACTGAGAA GCGGCTTTTG GACGATGTGC TGGCCATGTT TGTCCTCCAT CATCCCGAGC ATGGTCATGC AGTAATTCTT CCAATCATTT CATGTCTTAT TGATGGCTCG TTGGTGTACT GCAAGGAAGC TCATCCGTTT GCCTCTTTCA TATCTTTAGT TTGCCCAAGT AGTGAGAATG ACTATTCGGA GCAATGGGCT TTGGCATGCG GAGAAATCCT TCGCATTTTG ACTCATTACA ATCGTCCCAT ATATAAGACT GAGCAACAAA ATGGAGAAAC CGAGAGAAAT TGTTTGAGCA AAGCTACAAC AAGTGGTTCT CCGACTTCAG AGCCTAAGGC TGTATCACCA ACACAGCATG AAAGGAAACC TTTAAGGCCT TTGTCTCCAT GGATCAGTGA TATACTACTT GCTGCTCCCC TGGGTATAAG AAGTGACTAC TTCCGATGGT GTAGTGGTGT AATGGGTAAA TATGCTGCTG GAGAGCTCAA GCCGCCAACC ATTGCTTCTC GAGGATCTGG TAAACATCCT CAACTGATGC CTTCAACGCC AAGATGGGCA GTTGCTAACG GAGCTGGTGT CATACTGAGT GTTTGTGATG ATGAAGTTGC TCGATATGAG ACTGCCACGC TGACAGCGGT TGCTGTCCCT GCACTTCTTC TTCCTCCCCC AACGACATCC TTAGATGAGC ATCTAGTTGC TGGCCTTCCA GCTCTTGAAC CATATGCACG TTTGTTTCAT AGATATTATG CCATTGCAAC TCCAAGTGCT ACTCAGAGAC TTCTTCTTGG ACTCTTAGAA GCACCACCGT CGTGGGCTCC AGATGCACTT GATGCTGCTG TACAGCTTGT GGAACTCCTT CGAGCTGCTG AAGATTATGC ATCTGGTGTA AGGCTACCCA GGAACTGGAT GCATTTGCAC TTCTTGCGGG CAATCGGGAT TGCTATGTCT ATGAGGGCAG GTGTTGCTGC TGATGCTGCA GCCGCTTTGC TTTTCCGCAT ACTCTCACAG CCAGCACTGC TTTTTCCTCC GCTAAGTCAA GTTGAGGGAG TAGAAATTCA ACACGCGCCT ATTGGTGGCT ACAGTTCAAA TTACAGGAAA CAGATAGAAG TTCCTGCAGC AGAAGCAACC ATTGAAGCCA CTGCCCAAGG AATTGCCTCA ATGCTCTGTG CTCATGGTCC TGAAGTTGAA TGGAGAATTT GCACTATATG GGAAGCTGCT TATGGATTGA TCCCTCTAAA TTCTTCAGCG GTTGATCTTC CTGAAATCAT AGTTGCTACC CCACTGCAAC CTCCTATCTT GTCATGGAAT CTATACATTC CACTCCTCAA AGTACTTGAA TATCTTCCAC GGGGGAGTCC TTCGGAAGCA TGCTTGATGA AAATATTTGT TGCCACAGTG GAAACAATAC TCAGTAGAAC TTTTCCGCCT GAATCATCCA GGGAACATAC CAGAAAAGCT AGATCGAGTT TTACCACAAG ATCAGCGACC AAAAACCTTG CTATGGCTGA GCTTCGTGCT ATGGTCCATG CTCTCTTTTT AGAATCATGC GCTGGTGTGG AATTAGCTTC ACGCCTTCTT TTTGTTGTGT TGACTGTATG TGTTAGCCAT GAAGCACAGT CTAGTGGTAG CAAGAGACCG AGAAGTGAAT ATGCTAGCAC TACCGAAAAT GTCGAGGCGA ATCAACCTGT ATCTGACAAT CAAACTGCTA ACCGTAAAAG TAGGAATGTC AAGGGACAGG GACCTGTTGC AGCATTTGAT TCATACGTTC TTGCTGCTGT TTGTGCTCTT GCCTGTGAGG TTCAGCTGTA TCCTATGATC TCTGGAGGGG GGAACTTTTC CAATTCTGCC GTGGCTCGAA CTATTACAAA GCCTGTAAAA ATAAATGGGT CATCTAACGA GTATGGAGCT GGGGTTGACT CGGCAATTAA TCATACACGC CGAATTTTGG CAATTCTAGA GGCACTCTTT TCATTAAAAC CATCTTCTGT AGGGACTCCA TGGAGTTACA GTTCTAGTGA GATAGTTGCT GCGGCCATGG TTGCAGCTCA TATTTCCGAA CTGTTCAGAC GTTCAAAGGC CTTGACGCAT GCGTTGTCTG GGTTGATGAG ATGTAAGTGG GACAAGGAAA TTCATAAAAG AGCATCATCA TTGTATAACC TCATTGATGT TCACAGCAAA GTTGTTGCAT CTATTGTTGA CAAAGCTGAA CCCTTAGAAG CCTACCTTAA GAATACACCG GTTCAGAAGG ATTCTCTGAC CTGTTTGAAC TGGAAACAAC AGAACACATG TGCAAGCACC ACATGCTTTG ATACAGCGGT GACATCCGCC TCAAGGACTG AAATGAATCC AAGAGGAAAC CATAAGTATG CTAGACATTC AGATGAAGGC TCAGGGAGAC CCTCAGAGAA GGGTATCAAA GATTTCCTCT TGGATGCTTC TGATCTAGCA AATTTCCTCA CAGCTGATAG ACTCGCAGGG TTCTATTGTG GTACACAAAA GCTTTTAAGG TCAGTGCTTG CAGAGAAACC GGAGCTGTCT TTCTCCGTTG TTTCACTGTT ATGGCACAAA CTGATTGCTG CTCCTGAAAT CCAGCCCACC GCAGAAAGCA CCTCTGCGCA ACAAGGATGG AGACAGGTTG TTGATGCGCT ATGCAATGTC GTATCTGCAA CGCCAGCAAA AGCAGCTGCA GCAGTTGTTC TTCAGGCTGA GAGGGAGTTA CAGCCTTGGA TCGCCAAAGA TGATGAAGAA GGTCAGAAAA TGTGGAAAAT CAACCAACGG ATAGTCAAAG TGTTGGTGGA ACTCATGCGC AATCATGACC GGCCTGAGTC ACTGGTGATA CTGGCAAGTG CATCAGATCT TCTTCTGCGG GCAACTGATG GAATGCTTGT TGATGGGGAA GCTTGTACAC TACCTCAACT TGAGCTACTT GAAGCCACAG CAAGAGCAAT ACAGCCGGTG CTAGCTTGGG GACCATCTGG ACTTGCAGTG GTCGACGGTT TATCCAATCT ATTGAAGTGT CGTCTACCAG CAACAATACG GTGCCTTTCA CACCCAAGTG CACACGTACG TGCCTTAAGC ACGTCAGTAC TACGTGACAT CATGAACCAA AGCTCCATAC CCATCAAAGT AACTCCAAAA CTGCCAACAA CAGAGAAGAA CGGAATGAAC AGCCCGTCCT ATCGATTCTT CAACGCCGCC ACGATAGACT GGAAAGCCGA TATCCAAAAA TGCTTGAACT GGGAAGCTCA CAGCTTGCTC TCCACAACTA TGCCTACTCA GTTTCTCGAC ACGGCAGCTC GAGAACTCGG CTGTACTATA TCCTTGTCCC AATAACGAGC GCCCGCGCTT TTGTTTTT |
| Length | 3568 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9575480.. 9581019 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G22770.1 |
| Description | gigantea protein (GI) |
| TAIR curator summary | Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression. |
| Alias | [FB][GI][GIGANTEA] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg939656 | pseudo-response regulator 7 |
| 2 |
Ahg496615 | dentin sialophosphoprotein-related |
| 2.44949 |
Ahg939212 | Fatty acid/sphingolipid desaturase |
| 3 |
Ahg483346 | cold regulated 15b |
| 3.16228 |
Ahg942000 | pseudo-response regulator 5 |
| 3.74166 |
Ahg483978 | B-box type zinc finger protein with CCT domain |
| 3.74166 |
Ahg483843 | pseudo-response regulator 9 |
| 4.47214 |
Ahg482064 | 16:0delta9 desaturase 2 |
| 4.58258 |
Ahg481828 | cytochrome P450, family 707, subfamily A, polypeptide 2 |
| 5 |
Ahg476671 | NmrA-like negative transcriptional regulator family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|