Detail



ID : Ahg472424

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472424|fgenesh2_kg.1__2378__AT1G21880.2
Sequence
AGAAGAAAAC CAGAGATAAA AATCTCCAGC TTCATCTTCC ATAGTCCAAC TCTCTGTCAT TGTCCTCTAA GAGAGATTGA AAACCCTACG AGATTTTGAA TTTCGTAAAA CCCTAAACTA CTAAAATGAA AAACCCAGAA AAACCCATCT TCTTCTTCTT CGTCTCTCTA ATTCTAGCTT CGACTCTCGT CTTCACAGCT ACAGCGAAAT CAACAATCGA GCCTTGCTCA AGCAACGACA CTTGCAACTC TTTACTCGGC TACACGCTCT ACACCGACCT CAAAGTCTCA GAAGTCGCAT CTCTCTTCCA AGTAGACCCA ATCTCAGTCC TTTTAGCTAA CGCCATCGAT ATCTCTTACC CAGACGTCGA AAACCATATC CTTCCTTCAA AGCTCTTCCT CAAAATCCCA ATCACTTGCT CCTGCGTCGA CGGAATCAGG AAATCTGTCT CTACCCATTA CAAAACCCGA CCTTCCGACA ATCTAGGATC GATTGCTGAC TCTGTTTACG GAGGTTTGGT CTCTGCTGAG CAGATCCAGG AAGCTAACTC GGTGAATGAC CCGTCGTTGC TTGATGTTGG GACGAGTCTT GTTATCCCCT TGCCTTGCGC TTGTTTCAAT GGCACCGACA ATTCTTTGCC GGCGGTTTAT TTGTCGTATG TGGTTAGGGA GATTGATACA TTGGTCGGAA TTGCGAGGAG GTATTCGACT ACTATTACTG ATTTGATGAA TGTGAATGCT ATGGGAGCTC CTGATGTTAG TTCTGGAGAT ATTCTCGCTG TTCCTTTGTC AGCCTGTGCT TCAAAGTTCC CCAGATATGC ATCGGATTTC GGATTGATTG TTCCAAATGG TAGCTACGCT TTAGCTGCAG GTCATTGTGT GCAATGCAGC TGTGCGCTTG GGAGCCGCAA TTTGTATTGT GAGCCTGCTT CTCTAGCCGT CTCTTGTTCA AGTATGCAGT GTAGAAACAG CAACCTCATG CTCGGTAACA TCACGGTGCA GCAGAGTAGC GCTGGCTGTA ATGTTACAAC CTGTGATTAC AATGGTATTG CCAACGGCAC TATCTTGACC ATGCTGACCA GGTCTCTTCA ACCCCGATGT CCCGGACCTC AACAATTTGC GCCGCTTCTA GCTCCACCGG ATACTGTTCC TAAGGATGTA ATGTATGCAC CAGCACCTTC ACCAGATTTT GATGGTCCAG GATCCATAGC ATCTTCACCA AGATCATCTG TGCTTCCTTC AGGCGGTGAT TCCGTCCCAG GTAACCCCGC TAATGGTCCA GCCGGTAGCA TCTCAATCGC CTCTGCCTCC TCAGTTAGCT ACTTCATTAT CACATTTCTC ATCTCCATTG CTTCTTTTTC CCTTGTTTTG TCATCTTGAT TCAACAACAA TTGTTTATTT TCCGCGCATT GGAAACTCCT ATGTGAAATT CTTGATGAGT AAAACCAAAA CATTGGTTTT TGATCTCTTT GATAATATTT GAAGTTGCAT ATCTC 
Length1495
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9018759.. 9020665
Download Sequence
A.thaliana
AGI-codeAT1G21880.2
Descriptionlysm domain GPI-anchored protein 1 precursor
TAIR curator summary
Alias[LYM1][LYP2][lysm domain GPI-anchored protein 1 precursor][LysM-containing receptor protein 2]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg472662 MLP-like protein 423
9.74679 Ahg478745 O-Glycosyl hydrolases family 17 protein
10.8628 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
11.8743 Ahg487523 Eukaryotic aspartyl protease family protein
16.7332 Ahg471223 Leucine-rich repeat protein kinase family protein
17.5499 Ahg471757 CYCLIN A2;3
19.7484 Ahg927503 Leucine-rich repeat (LRR) family protein
21.4476 Ahg480193 O-Glycosyl hydrolases family 17 protein
22.9129 Ahg484659 Ribosomal protein L34e superfamily protein
24.3721 Ahg477690 Li-tolerant lipase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression