Detail



ID : Ahg472522

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472522|fgenesh2_kg.1__2476__AT1G22780.1
Sequence
TCATATTAGG TTCGAAAACC CTAAAGGAGT TACGCCGCTT ATAACAGACC TGACCTTCTT AACCTGTGGT GGCGCCTCCA GAGTCTGTGA AAGAGCTTAA TCCTTGTATC GCGATCTTTC TCGGCATCCA AAAATGTCTC TAGTTGCGAA CGAGGAGTTT CAGCATATTT TGCGTGTGCT CAACACTAAT GTCGATGGGA AGCAAAAGAT TATGTTTGCC TTGACCTCGA TCAAGGGTAT TGGAAGGCGA TTGGCCAACA TTGTGTGCAA GAAGGCTGAT GTTGACATGA ACAAGAGGGC TGGAGAACTA AGTGCTGCAG AAATCGACAA CCTCATGACA ATCGTTGCGA ACCCTCGTCA GTTCAAGATC CCAGACTGGT TCTTGAACAG GCAAAAGGAT TACAAGGATG GGAAATACTC CCAAGTTGTT TCCAATGCTC TGGACATGAA GCTGAGAGAT GATCTTGAGC GTCTCAAGAA GATCAGGAAC CATCGTGGTC TGAGGCACTA CTGGGGTCTC CGTGTACGTG GACAGCACAC CAAAACCACC GGACGACGTG GAAAGACTGT TGGTGTCTCC AAGAAGCGTT AAAAAAGAGT TGGTGCTTGG TTCAATGGCT TTGCTTTGTT TTGTATTGTT TTTTGCAGAA GAGATAGTTT AAGCAATGTT GTTTCATCAA AAGACGGTCT TAGCTTTTAC AATATATAAT TGAATCCAAA AACTATGTTG TTCCTAGTCT TTTTGTTACA TTCTCTTAAA ATCTGCTT 
Length768
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9581405.. 9582821
Download Sequence
A.thaliana
AGI-codeAT1G22780.1
DescriptionRibosomal protein S13/S18 family
TAIR curator summaryS18 ribosomal protein involved in the binding of f-Met tRNA during initiation of mRNA translation. Expression restricted to meristems. Mutant phenotype-pointed first leaves,reduced fresh weight, growth retardation.
Alias[PFL][PFL1][RPS18A][POINTED FIRST LEAVES][POINTED FIRST LEAVES 1][40S RIBOSOMAL PROTEIN S18]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg477492 Ribosomal protein S7e family protein
7.48331 Ahg489251 Ribosomal protein L13e family protein
8.12404 Ahg496177 GTP binding Elongation factor Tu family protein
9.79796 Ahg483266 Ribosomal protein S5 family protein
11.4018 Ahg929678 receptor for activated C kinase 1C
11.4891 Ahg486792 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
15.5885 Ahg493389 Ribosomal L27e protein family
18.4932 Ahg476190 Ribosomal protein L18e/L15 superfamily protein
18.7083 Ahg487065 Ribosomal protein L4/L1 family
19.799 Ahg486011 Ribosomal protein L35Ae family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression