Detail



ID : Ahg929678

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929678|scaffold_302135.1
Sequence
CGCTCTGTTA CGCCATTTTC GTGAGTAAGA AGAAGAAACC CTAAGAGTCT CTCCCCCAAA ACCTCTAACC ATGGCCGAGG GACTCGTATT GAAGGGCACT ATGCGGGCTC ACACCGACAT GGTCACCGCC ATCGCTACAC CAATCGACAA TTCCGACATC ATCGTCACAG CGTCGCGTGA CAAATCCATC ATCCTCTGGA AACTCACCAA GGACGACAAG TCTTACGGTG TTGCTCAGCG TAGGCTCACA GGTCACTCTC ACTTCGTCGA AGATGTTGTT CTCTCATCGG ACGGTCAGTT TGCACTCTCC GGAAGCTGGG ACGGTGAGCT CCGTCTCTGG GATCTCGCTA CTGGTGTCTC CACTCGCAGA TTCGTCGGAC ACACGAAAGA TGTGCTCTCT GTAGCATTCT CTGTTGATAA CCGTCAGATC GTATCAGCGT CTCGTGACCG TACGATCAAG CTGTGGAACA CACTCGGTGA ATGCAAGTAC ACGATCTCTG AGCAAGGAGA TGGTCACAAG GAATGGATTA GCTGTGTGAG GTTTAGCCCT AACACGCTTG TGCCTACCAT TGTTTCTGCT TCTTGGGATC ACACCGTGAA AGTCTGGAAT CTCCAGAACT GTAAGCTGAG GAACTCTCTT GTTGGTCACT CTGGTTACCT CAACACTGTG GCTGTCTCGC CTGATGGTTC GCTATGCGCC AGTGGTGGGA AAGATGGTGT TATCTTGTTG TGGGATTTGG CTGAAGGAAA GAAGTTGTAT TCGCTTGAGG CTGGCTCGAT TATTCACTCG CTTTGCTTCA GTCCTAACAG ATACTGGTTG TGTGCTGCTA CTGAGAATAG CATTAAGATA TGGGATCTTG AGAGCAAGTC TGTTGTTGAG GACTTGAAGG TTGATCTTAA GGCTGAGGCA GAGAAGACTG ATGGTGGTGT TGGAACTGGT AACCAGAAGA AGGTGATTTA CTGCACAAGC TTAAACTGGA GTGCAGATGG AAGCACATTG TTCAGTGGTT ACACTGATGG AGTTGTCAGA GTCTGGGGTA TTGGTCGTTA CTAGAGACAG ATGAAGAAGA AGAT 
Length1074
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7297576.. 7298928
Download Sequence
A.thaliana
AGI-codeAT3G18130.1
Descriptionreceptor for activated C kinase 1C
TAIR curator summaryEncodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.
Alias[RACK1C][RACK1C_AT][receptor for activated C kinase 1C]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg478235 Ribosomal protein L10 family protein
8.48528 Ahg478543 ribosomal protein 5A
9.21954 Ahg485949 ribosomal protein L23AB
9.21954 Ahg919605
9.8995 Ahg488462 Ribosomal protein S7e family protein
10 Ahg478476 eukaryotic translation initiation factor 3G1
10.3923 Ahg477683 Ribosomal protein S5 domain 2-like superfamily protein
11.225 Ahg496177 GTP binding Elongation factor Tu family protein
11.4018 Ahg472522 Ribosomal protein S13/S18 family
11.7473 Ahg926602 40s ribosomal protein SA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression