Detail



ID : Ahg472778

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472778|fgenesh2_kg.1__2732__AT1G26420.1
Sequence
ATGAAAGAAG CCCTTTCTGT TTTGTGTCTT GTTCTTTTGG TTTCGGTTTT AGAAGCAGCA GTAACGAAAC CAAAATTTGG GGACTTCATC GAATGCCTTC GCTATCGTAC AAGTTCGGAG AATCCAATCA CCAATGCCCT CTCCATCGCC GATAACACCA CCACCTTCTT GTCTTCTTAC TTGTCCTACA CGAAAAACAG GAGGTACTCA AGCCCTAACT TCAAAAAACT ACTAGCTATC GTAGCGGCGA AACATGTATC TCATGTTCAG GCCACAGTGG TCTGCGCAAA GACCAACGGT ATACAACTGC GTATCCGAAG CGGCGGTCAT GACCTCGAAG GCCTTTCTTA CAGGTCGTCT GTGCCATTTG TCATTCTCGA CATGTTCAAT CTCAGATCTA TTACTGTTGA CGTATCGAGC AAGAAAGCAT GGGTTCAAGC TGGTGCAACC TTGGGAGAGC TCTACGTAAA GATCAATGAG GCAAGCCAAA CGCTAGCATT TCCAGCTGGC GTTTGCCCTA CGGTAGGAGT AGGAGGGCAC ATTAGCGGTG GAGGGTATGG AAATCTGATG AGAAAATTCG GAATTACAGT GGATCATGTC ATTGATGCTC AATTAATTGA TGTCAACGGC AAGCTCTTAA ATCGAGCTAC CATGGGAGAA GATCTCTTTT GGGCCATTCG AGGCGGCGGT GGTGCGAGTT TTGGAGTTAT CCTCTCTTGG AAAATCAACC TCGTCGAAGT TCCAAAGATC CTGACAGTTT TTAAGGTTAA TAAAACATTG GAACAAGGAG GCACTGATGT TCTCTACAAG TGGCAGCTTG TCGCTACCAA ATTCCCTGAT GATCTTTTTA TGAGAGCATG GCCTCAGATC GTAAATGGAA CAGAACGTGG CGAGAGAACC ATCGCAGTTG TATTCTATGC TCAGTTCTTG GGTCCAGCTG ATAAGCTGAT GGCGATAATG AACCAGAGAT TGCCTGAATT AGGGCTAAAA CGTGAAGATT GTCACGAAAT GAGCTGGTTT AACACGACAT TGTTTTGGGC TGATTACCCG GTGGGAACAC CGAAGAGCGT TCTTCTAGAT AGGCCGACGA ATCCAGGATT CTTTAAGAGC AAATCAGATT ACGTTAAAAC ACCAATCCCA AAAGAAGGAC TAGAGAAGCT TTGGAAGACA ATGTTTAAAT TCAACAATAT TGTGTGGATG CAATTCAATG CTTACGGTGG AGTGATGGAC CGGATTCCTA CAACTGCCAC AGCGTTTCCT CATCGTAAAG GAAACATGTT CAAGGTTCAA TACTCTACGA CGTGGTTGGA TGCAAACGCC ACAGAGACTA GCCTAAGTAT GATGAAGGAG CTTTACGAGG TTGCGGAACC GTACGTGTCA AGTAACCCAA GAGAGGCCTT CTTTAATTAC AGAGACATCG ATATTGGAAG CAATCCAAGT AGTGAGACAG ACGTAGATGA GGCTAAGATC TATGGATACA AGTATTTCTT GGGGAATTTG AAGAGACTGA TGCAAGTCAA AGCTAAGTGT GATCCTGAGA ATTTTTTCAA GAACGAGCAG AGTATTCCTC CTGTTCGTGT AATGTAG 
Length1587
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10790564.. 10792150
Download Sequence
A.thaliana
AGI-codeAT1G26420.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg481994 cytochrome P450, family 71, subfamily A, polypeptide 13
4.89898 Ahg918888 Chitinase family protein
6 Ahg475766 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
6.78233 Ahg483400 NAC domain containing protein 42
9.79796 Ahg472779 FAD-binding Berberine family protein
10.4881 Ahg915669 Glutathione S-transferase family protein
11.6619 Ahg472361 Protein kinase family protein
12.2474 Ahg478321 monodehydroascorbate reductase
14.4568 Ahg480771
15.2971 Ahg475116 WRKY family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression