Detail



ID : Ahg478321

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478321|fgenesh2_kg.3__1022__AT3G09940.1
Sequence
TTTTATTCAT TAATGGCGGA AGAGAAAAGC TACAAGTACG TGATCATTGG AGGTGGTGTA GCCGGCGGTT ACGCGGCGAG AGAGTTTTCG AATCAGGGCC TGAAGCCTGG TGAACTCGCA ATCATTTCCA AGGAACCAGT GCCTCCTTTT GAGCGTCCTG AACTAACCAA GGCATATATC GACCTCGAAG TCAATCCGAC CCTTGCAAAG ATCTATGTCT GTGCTGGAAC TGGAGAAGCG AAGCAGTACC CTAACTGGTA CAAAGAGAAA GGGATTGATC TAATTGTGAG CACAGAGATA GTCAAAGCAG ATCTTGCTTC GAAGACACTT GTTAGTGATG ATGGAAAAAT TTACAAGTAC CAAACTTTGC TAATTGCAAC CGGTTCTACT AACATAAGAT TGTCAGAAAT TGGCGTCCAA GAAGCAGATG TTAAGAATAT ATTCTACCTA AGAGAAATCG AAGATAGTGA TGAGCTTTCG TTTGCTATGG AACTATATGT GCAAAGGGGA AAGGCCGTGG TTATTGGCGG CGGTTTCTTA GGGCTTGAGA TAAGTTCTGC TCTAAGGGCT AATAATCATG AAGTGACCAT GGTTTTTCCA GAACCTTGGA TTATACACCG GTTTTTCACC GCTGAGATAG CTTCATTCTA TGAGGGTTAC TGTGCCAACA AGGGAATCAA AATCATCAAG GGAACTGTAG CCACTGGATT CAGCACCAAC TCAGATGGAG AGGTCACGGA GGTGAAACTA GAGGATGGAA GAACCCTAGA AGCTAACATA GTGGTCGCCG GTGTCGGTGC TAGACCGGTC ACCTCACTCT TCAAAGGCCA AGTTGAAGAG GAGAAGGGTG GAATAAAGAC TGATGGATTC TTCAAAACAA GTGTACCTGA TGTATACGCA CTTGGAGATG TAGCTACATT CCCCATGAAA ATGTATGGCG GGATGAGGCG TGTTGAACAC GCCGACAATG CTCGCAAATC TGCTGCACAA GCAGTCAAAG CAATCAAAGC GGCTGAAGAA GGGAAAACGA TCCCAGATTA CGATTATCTT CCCTATTTCT ACTCTCGGTT TTTCAATCTC TCGTGGGAAT TCTATGGGGA CAATGTTGGA GAATCTGTAC TGTTTGGAGA TAATGACCCG AAATCTCCCA AGCCGAAGTT TGGGACGTAT TGGGTTAAAG ATGGGAAAGT AGTAGGGGTG TTTCTAGAAG GAGGAACTCA AGAGGAACAC AAGGCTATTG CTAAAGTGGC ACGAGCACAA CCTTCCGTTG AGAGTCTTGA CGTGTTATCA GAGGAAGGCC TTTCTTTCGC CACCAAGTTC TATAGCAGCT AGTCTCTTTG AGACATTGGG TCTTGTTCTT GGGTATAAGT CGCATTGATT GATGTAATAA TCTCCTTTGT CCTTGATTTC ATCGAGCCCC TATTATATTT GGCAAAATAA ATTAGATATA ATAATGCATT TT 
Length1462
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3703879.. 3706636
Download Sequence
A.thaliana
AGI-codeAT3G09940.1
Descriptionmonodehydroascorbate reductase
TAIR curator summaryEncodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.
Alias[ATMDAR3][MDAR2][MDAR3][MDHAR][ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3][MONODEHYDROASCORBATE REDUCTASE 2][MONODEHYDROASCORBATE REDUCTASE 3][monodehydroascorbate reductase]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg900074 Protein of Unknown Function (DUF239)
5.2915 Ahg894427 SPFH/Band 7/PHB domain-containing membrane-associated protein family
8.3666 Ahg918888 Chitinase family protein
8.66025 Ahg484459 Cytochrome P450 superfamily protein
10.4881 Ahg481994 cytochrome P450, family 71, subfamily A, polypeptide 13
10.8167 Ahg935611 cyclic nucleotide gated channel 3
11.6619 Ahg475766 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
12.2474 Ahg472778 FAD-binding Berberine family protein
12.9615 Ahg933857 protein kinase family protein
14.0712 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression