Detail



ID : Ahg472995

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472995|fgenesh2_kg.1__2949__AT1G27940.1
Sequence
ATGGATAACA CAGAAGAACG ATCCTCTAAT GGAAACATAC AAGCCGAGAC GGAAGCAGTG GAGGAGAAGA AAAAGATAAA GAAGGAATCA GTGTCATTGA TGGGTTTGTT TAGCGCAGCA GATAAACTTG ATTACTTTCT GATGTTGCTA GGAGGTTTAG GTGCGTGTAT ACATGGCGCT ACGCTTCCGC TCTTCTTCGT GTTCTTTGGG AAAATGCTAG ATTCTCTTGG AAATCTTTCT ACAGATCCTA AAGCCATATC TTCCCGCGTT TCACAGAATG CTCTGTATTT GGTCTACTTA GGATTGGTCA ATTTGGTATC AGCTTGGATC GGAGTTTCTT GTTGGATGCA AACAGGGGAA AGACAAACAG CGCGATTGCG TATAAATTAT CTCAAATCGA TCTTAGCAAA AGACATTACT TTCTTTGACA CAGAAGCTAG AGATTCAAAT CTCATTTTTC ACATCTCAAG TGACGCGATC TTGGTTCAAG ATGCAATTGG CGATAAGACA GACCATGTTT TGCGGTATTT ATCTCAGTTC ATCGCGGGAT TTGTCATCGG TTTTTTGTCA GTATGGCAAC TAACGCTGCT TACCTTAGCA GTGGTTCCAT TAATAGCAGT TGCAGGAGGA GGATATGCTA TAATCATGTC CACAATCTCA GAGAAGAGTG AAACTGCTTA TGCTGATGCA GGAAAAGTCG CAGAAGAGGT TATGTCACAG GTGAGAACAG TGTATGCATT TGTAGGAGAA GAGAAAGCTG TAAAATCTTA CTCAAATTCT CTCAAGAAAG CTTTGAAACT CGGTAAAAGG AGCGGTCTTG CTAAAGGTTT AGGAGTTGGA TTAACATATA GCCTCTTGTT CTGTTCTTGG GCATTGCTTT TGTGGTATGC AAGTCTTCTT GTACGTCACG GCAAAACCAA TGGTGCAAAA GCCTTCACAA CGATCCTCAA TGTCATTTTC AGTGGATTCG CCTTAGGTCA AGCCGCGCCT AGCTTATCCG CGATTGCCAA AGGCAGAGTT GCTGCTGCAA ATATATTCAG AATGATAGGA AACAACAGTC TTGAAAGTTC TGAAAGACTA GAAAATGGAA CAACATTGCA AAATGTAGCT GGGAGGATTG AGTTTCATCA AGTGTCTTTC GCATATCCTT CTAGACCAAA CATGGTTTTT GAGAATCTTA GTTTCACAAT ACGTTCGGGC AAGACTTTTG CATTTGTCGG TCCAAGTGGT TCAGGGAAAA GCACAATCAT ATCAATGGTG CAACGTTTCT ATGAACCTAA CTCAGGGGAG ATTCTCTTGG ATGGAAATGA CATCAAGAGC CTAAAGCTAA AATGGTTGAG AGAACACCTT GGATTAGTGA GTCAAGAACC AGCATTATTC GCCACGACTA TAGCTTCCAA TATTATTTTT GGTAAAGAGA ATGCGAATAT GGATCAGATC ATAAAAGCCG CTAAAGCAGC AAATGCAGAT TCTTTCATTA AATCATTACC CAATGGTTAC AATACTCAGG TTGGAGAAGG AGGAACTCAG CTCTCTGGAG GTCAGAAACA GAGGATTGCC ATTGCTAGAG CAGTTCTAAG AAATCCAAAG ATATTACTTT TAGATGAAGC AACGAGCGCT CTTGATGCCG AATCAGAGAA GATTGTTCAG CAAGCACTTG ACAATATCAC GGAAAATAGA ACAACAATTG TTGTTGCCCA TAGATTATCT ACCATTCGAA ATGTTGACAA GATTGTTGTA TTGAGAAAGG GTCAGGTTAC GGAAACTGGA AGCCACTCAG AATTGATGTC AAGAGGAGGA GATTACGCGA CTCTTGTCAA TTGCCAAGAG ACAGAACCTC AAGAAAACTC GAGATCAATT ATGTCTGAAA CTTGTAAATC TCAAGTTGGA TCTTCTAGTT CAAGAAGAAT TTCTAGCTCA AGGAGGACTT CAAGCTTCAG GGAAGACCAA GAGAAGACTG AAAATGATTC AAATGACAAA GATTTTAGCT CATCTTCAAT GATATGGGAA CTTATAAAGC TGAATTCTCC AGAATGGCCA TATGCATTAC TTGGCTCAAT TGGTGCAGTT CTTGCTGGAG CACAAACTCC ATTGTTCTCT ATGGGGATTG CTTATGTGTT AACTGCATTT TATTCGCCTT TTGCTAATGC GATCAAGCGC GACGTAGAAA AGGTAGCTAT TATCTTTGTT GGAGTTGGAA TAGTAACAGC ACCTATATAT CTTCTCCAAC ATTACTTCTA TACACTTATG GGAGAGCGTC TTACTTCTCG GGTTCGCTTA TCCTTGTTCT CAGCGATTCT TTCGAATGAG ATTGGATGGT TTGATCTGGA TGAGAACAAC ACTGGCTCAC TTACTTCAAT CTTGGCTGCT GATGCAACTT TGGTGAGGAG TGCTCTAGCG GATCGCCTCT CGACAATAGT GCAAAACTTG TCTCTTACAG TCACAGCATT AGCACTTGCC TTTTATTACA GTTGGCGTGT TGCAGCTGTC GTAACGGCTT GTTTTCCTCT TCTCATTGCC GCTTCACTTA CTGAGCAACT ATTTCTAAAA GGCTTTGGAG GAGACTACAC AAGGGCTTAC TCTAGAGCAA CTTCAGTGGC GCGTGAAGCA ATTGCAAATA TAAGAACTGT CGCTGCGTTT GGTGCCGAAA AGCAGATCGC GGAACAGTTT ACTTGTGAGC TAAGCAAGCC CACCAAGAAT GCCTTTGTTA GAGGTCATAT CTCTGGATTT GGATACGGAT TATCTCAGTT TCTTGCGTTC TGCTCCTACG CTCTTGGTCT CTGGTACGTA TCGGTTTCGA TCAAGCATAA GGAGACGAAT TTTGGGGATA GTATCAAATC TTTTATGGTG TTGATCGTCA CAGCTTTCTC AGTTTCGGAA ACGCTTGCTT TGACACCAGA TATCGTGAAG GGCACGCAAG CACTCGGGTC AGTTTTCAGG GTTTTACATA GAGAGACTGA GATACCTCCA GACCAGCCTA ACTCGAGAAT GGTTAGTCAG ATCAAAGGAG ATATAGAGTT TAGAAACGTG AGTTTTGTGT ATCCCACGAG ACCCGATATT AACATTTTCC AAAACCTAAA CCTCCGAGTT TCAGCCGGGA AAAGTCTTGC AGTCGTGGGG CCTAGTGGTT CTGGAAAAAG CACAGTGATC GGACTGATCA TGAGATTCTA CGACCCTAGC CACGGAAATC TCTGCATCGA TGGGCAGGAC ATAAAAACCC TAAACCTACG TAGCTTGCGC AAGAAGCTAG CGTTAGTTCA GCAAGAACCA GCTCTGTTTT CAACAACAAT ACACGAGAAC ATCAAGTACG GGAACGAGAA CGCATCAGAG TCAGAGATCA TCGAAGCCGC AAAGGCCGCG AACGCGCACG AGTTCATAAG CAGGATGGAA GAAGGGTACA AGACGTACGT AGGTGATAAG GGAGTGCAGT TATCAGGTGG TCAGAAACAG AGAGTGGCTA TTGCACGGGC GGTTTTAAAG GATCCTTCAG TGCTTCTCCT TGATGAGGCA ACAAGTGCTT TGGACACGAG CTCGGAGAAA CTAGTCCAAG AGGCGCTAGA CAAGCTGATG AAGGGACGAA CCACGGTATT GGTAGCTCAT AGGCTCTCGA CCATAAGAAA AGCAGACACG ATCGCTGTGT TGCATAAGGG AAGAGTTGTG GAGAAGGGAA GTCATAGAGA GCTTGTTTCA ATACCTAATG GGTTTTATAA GCAATTGACG AGTCTTCAAG AAGTGGTTTG A 
Length3741
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11647725.. 11652269
Download Sequence
A.thaliana
AGI-codeAT1G27940.1
DescriptionP-glycoprotein 13
TAIR curator summary
Alias[ABCB13][PGP13][ATP-binding cassette B13][P-glycoprotein 13]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg470767 NAD(P)-binding Rossmann-fold superfamily protein
7.28011 Ahg902591 cytochrome P450, family 76, subfamily C, polypeptide 1
8.06226 Ahg925447 RNA polymerase subunit alpha
10.4881 Ahg473002 P-glycoprotein 14
10.583 Ahg331125 Leucine carboxyl methyltransferase
12.6886 Ahg492221 P-glycoprotein 2
15 Ahg920472 Inorganic H pyrophosphatase family protein
16.9706 Ahg335256 ATP binding microtubule motor family protein
17.8885 Ahg950891 Protein kinase superfamily protein
18.9737 Ahg479237 HY5-homolog
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression