Detail



ID : Ahg473414

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473414|fgenesh2_kg.1__3368__AT1G32240.1
Sequence
TCTCTCTCTA TATCTCTCAA AAATCTTTGC AAAATCTGCT TAACCTCAAA CAATATAAAC AACATTCTCA ACAAAACCCA GAAATCTCTT CCTCAAATCT TTAATACTCT TTTCTTTTTA AAAAAGGATA TCTTTCTCTT ATTATCTTCT TTGTCCTAAC CCAAAGAAAA ACAAGAACTA GGGTTCATCA TATCTGGAAA CCGACTGAAG AATCTCTTCA AGAAGAAGGA TAAGAAGTTA AAGGTCTCTT TCATGGAGTT ATTTCCTGCC CAGCCCGATT TATCCTTACA GATAAGTCCA CCGAACAGCA AACCATCATC AACATGGCAG AGAAGAAGAT CAACAACAGA TCAAGAAGAT CATGAAGAAC TCGATTTAGG GTTTTGGAGA AGAGCTCTTG ATTCAAGAAC ATCTTCTCTC GTCTCTAATT CCAGCTCAAA AACGATCAAT CATCCATTCC AAGACCTCTC GCTCTCTAAC AACTCTCATC ATCAACAACA ACAACATCAT CATCATCATC CTCAGCTTCT CCCTAATTGC AACGGCTCTA ACATCTTGAC CTCTTTCCAA TTTCCGACAC AACAGCAACA ACAACACTTA CAAGGGTTTC TTGCTCGTGA CCTTAATACT CACTTAAGAC CAATAAGAGG AATCCCTCTT TACCACAACC CTCCTCCACA TCATCACCGT CCGCCACCAC CGTGTTTCCC TTTCGATCCG TCGGCTCTAA TTCCCTCTTC CTCCTCTTCC TCGCCGGCTC TTACCGGAAA CAACAATAGC TTTAATACAA GTAGCGTTAG TAACCCTAAT TACCACAATC ATCATCACCA GACTCTAAAC AGAGCCAGAT TCATGCCAAG ATTCCCAGCT AAGCGAAGCA TGAGAGCTCC ACGGATGCGA TGGACCACCA CTCTCCATGC CCGGTTCGTT CACGCCGTTG AATTACTCGG TGGCCATGAA AGAGCAACAC CCAAATCAGT TCTTGAGCTC ATGGATGTCA AAGATCTAAC CTTGGCTCAT GTTAAGTCCC ATTTACAGAT GTACAGAACA GTGAAGACAA CCGACAAAGC AGCAGCTTCG TCAGGACAAT CTGATGTCTA TGAAAATGGA TCTTCAGGAG ATAATAACTC AGACGATTGG ATGTTCGATA TGAATCGAAA ATCTAGAGAT AGCGAGGAAT TGACGAATCC TCTAGAGAAA TCAAATGGTC TATGGACAAA TTCTTCCGGA GAAGCACGTT TGCATGGGAA GCTAATCGAT AATGTTGCAG AAATTATGCT ACCTTCTGAG AAGGAACTAG ATGGAAAGTG CTCAAGTTAT GAGAGAATAT CCTCAGAAGA GATGAGCTCA TCAAGCATCT CGGGAACAAG CCCATTCAAA CCAAATCTTG AGTTTACTCT GGGTCGATCT CACTAAATTT ATTGTTATAG CTAGCTAGTA ATTAATTAGT ATCAATTAAC TTATATTTTT GGCTAATGAC TAGTTTCGAT ATTCATATCA ATTGAATAAG TGTTTTTTTT TTACACTGTT CTTTTTCCTT ATCTATTGAG 
Length1550
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13958687.. 13963779
Download Sequence
A.thaliana
AGI-codeAT1G32240.1
DescriptionHomeodomain-like superfamily protein
TAIR curator summaryEncodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.
Alias[KAN2][KANADI 2]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg495467 phytosylfokine-alpha receptor 2
11.4891 Ahg948342 Protein of unknown function (DUF679)
15.7797 Ahg926748 ETHYLENE-INSENSITIVE3-like 3
18.9737 Ahg492627 SWIB complex BAF60b domain-containing protein
19.2873 Ahg485510
24.454 Ahg487639 TCP domain protein 17
26.1916 Ahg330119 zinc ion binding
28.2666 Ahg893151
31.305 Ahg476239 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
31.4643 Ahg928006
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression