Detail



ID : Ahg893151

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893151|Al_scaffold_0006_1147
Sequence
ATGGTTTCTC AATCGAGAAG TAGAAACCTA ACACTGAGAT CCATGGCGAT GGTATTTGCC CAACCCAAGA AAAACTTACT TCCTCTCCTT CTCTTCCTCT TTTGTATCTC CTTCATCATT CTCCTCGTTC TCGTCTCCGA GACCACTCAC TCTAACGCCG GACGAGGAAC TACTTTCCGG CGAAATTACA ATGATCCCCC TCCTTTCACT TTCCTCATCA AGGTTCTCAC CTTTAACCGT CTCCACTCTC TCTCCCGCTG TCTCAGATCT CTCTCCGCCG CAGACTACGG CGTTTCCGGC GACAGAGGAC GCATTCACCT CCACGTCTAC ATCGATCATT TCAACCTCGC GCGGAACGAT ACACCTGTGG AAGATAACTT GAACAGCGCG AGGGAAATCC TAGGGTTTGT TGATAGATTC GAGTGGAGAT TTGGGGAAAA AGTAGTTCAC TATCGGACTG ATAACGCTGG ATTACAGGCG CAGTGGCTGG AAGCTTGGTG GCCGAGCTCA GATCACGAAT TCGCCTTCGT CGTTGAAGAT GATCTTGAGG TTTCTCCTCT TTACTATGGA ATTCTGGAAC GCATGATTCA TAAATACTAC TATGATACTT CTAATTTCAA TCCTTCCATC TATGGAGCTT CGCTTCAGAG ACCAAGGTTT GTTCCAGGTA AACATGGGAA TAAACTGCAT GTAGATCCCA AAACGAATCT GCTCTTATAT CAGTTAGTGG GAACTTGGGG ACAGCTTCTC TTCCCAAAAC CGTGGAAAGA GTTCAGACTA TGGTATGACG AGCACAAGTC GAATGGCAAG AAGCCTTTCC TTGATGGCAT GGTGACAAAT GGATGGTACA AGAGGCTGGG AGAACGAATA TGGACACCTT GGTTCATAAA GTTTGTTCAT TCTCGTGGCT ATTTTAACAT CTATACCAGT TTCCCGAATG AGGGGGCTTT AAGTGTTTCC CACAGGGATG CTGGTGTTAA CTATGGAAAA ACCGCTGGGC CAGACTCACA GTTATTGAAT AAAAGTGCTC TCAGTTCTGA TTCTCTGAAA CTCCAACCCT TGAGCAACCT TAAGTGGTAC GATTTCTGTT TCAGTGAAGT TGTTCCTGGT AGAGTTGTGA GAAACCTGAA TGAACTTGGC ACCATTCTTC CTTCCGTGCA GAGTGAGAAA ACCATAATTC TGGTCAGTCT ATATGGTGCA GAGAAGATGT TCACCAGGAA CTTACTCTGC CATTTCGAGA AGCTTAATAC TCTAAACCAC ATTTTTATAG GCCCTAGCTC TGAGTTGTTC TATGATCTTT CAAGAAGGGG ACATCCTGTG ATTGATGCGG ATATGCTTCT CGACAAGCTG ATCAAAAGCA AAACTTCTTA TCCAAACTCA GCGAAGGAGG CTCTGGGCAA TGCTTACGTT GTCAAGAAAT GCTTAGAACT TGGATACAGC ACCTGGGCAT TTTCAAGTAA CTCGCTTTTG GTTGATAAAG GTCCTCTCCT TGACAGAGTT AGCTCAGAGT ACGACATCTA TATCGGGGAA AGCTCTGGAA TTTTGATTGT TCAATCTTCA TCAGTCACTC AAAAGTTATG GAGCAATGAG TTTCTACACA GCATCACATC CACAGCAACT AAGAATCCGT CCCTAAATCA AAGTCTAGAT TATATTCATC TAGTGAAAGA GCTAGTGGAG CAAAAGGGCA AGAGGATTAA GACCATAGAG ACAATGGATA TTGCAGAAAA TACCAATGCC AACAGCGTAA ACCAATCGTT GGGAGATGGC AAGCCGGTGG TGTATTGGTC TCCTGAGGTT GCTCCCAATA TGATTCGGTC AAAGCTAGAA GAGTTGAACC TGTGGCTCAT CGATGACGAT CTCTCTTGCA AGGCCGTGGT TTGTCATAAT TCATAA 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4793438.. 4795728
Download Sequence
A.thaliana
AGI-codeAT5G12260.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.87401 Ahg919799 FAR1-related sequence 11
15.8745 Ahg322000
24.2487 Ahg490221 Protein phosphatase 2C family protein
27.2213 Ahg348635 protein affected trafficking 2
28.2666 Ahg473414 Homeodomain-like superfamily protein
30.2655 Ahg495190 Protein of unknown function (DUF3414)
35.9722 Ahg478277 Lung seven transmembrane receptor family protein
42.2847 Ahg949661 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
52.5357 Ahg935186 Magnesium transporter CorA-like family protein
56.6833 Ahg898177 MMS ZWEI homologue 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression