Detail



ID : Ahg473497

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473497|fgenesh2_kg.1__3451__AT1G33240.1
Sequence
ATTCTCTTTC TCTCTATCTA TCATCATCAT CCTCGTAATC CTCCCCTTTC TCCTTCAAAA AGGCTGCTTC TCTTTCTTAT TTCTCATCAA TGGTTTTATG AGATTATCAA AAACATTGAG CTAGAGAGAA AGAGAGAGAG AGTGTGTGTG TGTTGAAAAA GATTGAAAAT CATCAAGATT GATGGAGCAA GGAGGTGGAG GTGGTGGTGG TAATGAAGTG GTGGAAGAAG CTTCACCTAT TAGTTCAAGA CCTCCTGCTA ACAACTTAGA AGAGCTTATG AGATTCTCAG CCGCCGCGGA TGACGGTGGA GGAGGAGGAG GAGGAGGAGG AGGAAGTGCT TCTTCTTCAT CGGGAAATCG ATGGCCGAGA GAAGAAACAC TAGCTCTTCT TCGGATCCGA TCCGATATGG ATTCGACTTT TCGTGATGCT ACTCTCAAAG CTCCTCTTTG GGAACATGTT TCCAGAAAGC TATTGGAGTT AGGTTACAAA CGAAGTTCAA AGAAATGCAA AGAGAAATTC GAAAACGTTC AGAAATATTA CAAACGCACT AAAGAAACTC GTGGTGGTCG TCATGATGGT AAAGCTTATA AGTTCTTCTC TCAGCTTGAA GCTCTCAACA CTACTCCTCC TTCATCTTCC CTCGACGTCA CTCCTCTCTC CGTCGCCAAT CCCATTCTCA TGCCTACTTC TTCTTCTTCT CCATTTCCCG TCTTCCCTCA ACCGCAACCG CAACCGCAAC CGCTTCAAAC GCATAATGTC TCTTTTACTC CTACTCCACC ACCTCCTCCA CTTCCTTCAA TGGGTCCGAC CTTTCCCGGT GTTACCTTCT CGTCTCATAG CTCATCGACG GCTTCAGGAA TGGGGTCTGA TGATGATGAC GACGAGATGG ACGTGGATCA AGCTAACATT GCGGGGTCTA CTAGCCGAAA ACGCAAACGT GGAAACCGCG GTGGAGGCGG TAAAATGATG GAATTATTTG AAGGTTTGGT GAGACAAGTA ATGCAAAAGC AAGCGGCTAT GCAACGGAGT TTCTTGGAAG CTCTTGAGAA GAGAGAGCAA GAACGTCTTG ATCGAGAAGA AGCTTGGAAA CGTCAAGAAA TGGCTCGGTT AGCTCGAGAA CACGAGGTCA TGTCTCAAGA ACGAGCCGCC TCTGCTTCTC GTGACGCCGC AATCATTTCA TTGATTCAGA AAATTACTGG CCACACCATT CAGTTACCTC CTTCTTTATC ATCACAACCG CCTCAACCGC CTCCTCCACC GTATCAACCG CCACCCGCGG TTGCTAAACG TGTGGCAGAA CCACCATTAT CAACAGCTCA ATCTCAATTA CAACAACCAA TAATGGCGAT TCCACAACAA CAAATTCTTC CTCCTCCTCC TCCTCCTCCT CCTCATCTTC CTCATCAACC AGAACAGAAA CAACAACAAC AACAACAACC GCAACAACAA GAGATGGTCA TGAGCTCGGA ACAATCATCA TTACCATCAT CATCAAGATG GCCAAAGGCG GAGATTCTAG CGCTTATAAA CCTAAGAAGC GGAATGGAAC CAAGGTACCA AGATAATGTC CCTAAAGGAC TTCTATGGGA AGAGATCTCA ACGTCAATGA AGAGAATGGG ATACAACAGA AACGCTAAGA GATGTAAAGA GAAATGGGAA AACATAAACA AATACTACAA GAAAGTTAAA GAAAGCAACA AGAAACGTCC TCAAGATGCT AAGACTTGTC CTTACTTTCA CCGTCTTGAT CTTCTTTACC GCAACAAAGT ACTCGGTAGT GGTGGCGGTT CTAGCACTTC TGGTCTACCT CAAGACCAAA AGCAGAGTCC AGTCCCTGCG ATGAAACTGC CACAAGAAGG ACTTGTTAAT GTTCAACAAC CTCATGGGTC AGCTTCAAGT GAGGAAGAGG AGCCTATAGA GGAAAGTCCA CAAGGAACAG AAAAGCCAGA AGACCTTGTG ATGAGAGAGC TGATGCAACA ACAACAAGAA TCAATGATAG GTGAGTATGA AAAGATTGAA GAGTCTCACA ATTATAATAA CATGGAGGAA GAGGAAGAGG AGATGGATGT AGAAGAACTA GACGAGGATG AGAAATCCGC GGCTTTCGAG ATCGCGTTTC AAAGCCCTGC AAACAGAGGA GGCAATGGCC ACACGGAACC ACCTTTCTTG ACAATGGTTC AGTAAAAACT CATTGATTCA AGAAAATGTA CTTATGTGTG CATAGTTTCT AAACAAACAC CCAAAAACAC AAAACACACA CACACACACA CACATCTGAC ACCACAAACT GAAAAATCAA GATCATCATC GATCTTCGAT TTTTCAGTGA ATACAATTCT TTTTCACATT CTTTCCCTTT TGTTCTTTTA TTTCTCACTC TCTCTTGTTT GTTTCTTCTT CTGTTCATTG TTTTCTTCTT CAACACCACC CACATGAACA AAAACTCTAG CTAAAGGTCT TTTAGATTAT TTGGAGTTGT AATTCATCAG CAAGTCTCAC ACTTTTTTCT TTTTTTCCTT AAAAACATTT GTTGATTGGT TAATTGGGGA ATAAAGAGTC TTTTTTTT 
Length2568
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14573843.. 14576862
Download Sequence
A.thaliana
AGI-codeAT1G33240.1
DescriptionGT-2-like 1
TAIR curator summaryEncodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.
Alias[AT-GTL1][ATGTL1][GTL1][GT2-LIKE 1][GT-2-like 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
4.89898 Ahg926133 B-box type zinc finger protein with CCT domain
5.2915 Ahg926846 Gibberellin-regulated family protein
6.48074 Ahg490494 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
6.85565 Ahg949899 regulatory components of ABA receptor 3
7.28011 Ahg946661
7.74597 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
7.74597 Ahg487939
8.83176 Ahg483546 Plant protein of unknown function (DUF946)
9.16515 Ahg492684 HSP20-like chaperones superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression