Detail



ID : Ahg483835

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483835|fgenesh2_kg.4__2895__AT2G46710.1
Sequence
AAACGATGAC TAACTTCTCC CGATCCAAAT CCACCGGAAC TATCGGTTTC CCGGAGTTTA AACCGACTCG ACCCGGTCCA GACATATACG AGAACGGCCA CAACGATGAC GACGAGTACG AGGAAGGACA TAGCACTACG AGCACAGACT ACTACGACGC TTCAACGCCG TTGAGCTCAC ACGCGTCAAG ATCAGGGAAC GGGTCCGGGT CGGGTCAGTT AACGATCGTA GACCTTCTTG CGGCGGTTCT GAGGAAGTCG CTGGTGATGT CGTGTGCCAT GGAGAGAGGG GACGATGACG TGGCGGCGTC TATGGATATA GGTTGGCCGA CGGAGGTTAA GCACGTGAGT CACGTGACTT TTGACCGGTT TAATGGTTTT CTTGGTCTTC CGTCTGAGCT CGAACCGGAG GTTCCTCCTC GAGCTCCTAG CGCCAGTGTA AGTGTATTTG GAGTATCGGC AAAGTCAATG CAATGCTCTT ATGACGACAG AGGAAATAGT GTCCCAACAA TCCTTCTCAG GATGCAAAAA CGTCTATACA CCGAAGGAGG TCTTAAAGCA GAAGGAATAT TCCGAATAAA TCCAGACAAC GGCAAAGAAG AGCATGTCCG AAGACAGCTA AACCGCGGTG TGGTACCACG TGGAATTGAC GTTCATTGCT TGGCAGGATT AATAAAGGCA TGGTTTAGGG AGCTACCTAC AGGAGTGCTT GATGTGTTGA CACCAGAGCA AGTGATGAGG TGTAACACAG AGGAGGATTG TAGCCGGCTA GTGACACTTC TTCCTCCCGT TGAATCTGCG CTTCTCGACT GGGCCATTGG TCTAATGGCG GATGTGGTGG AGCATGAACA GTTTAACAAA ATGAATGCTC GCAATGTAGC TATGGTCTTT GCCCCAAACA TGACTCAAAT GGCAGATCCT TTAACTGCAC TAATCCACGC GGTGCAAGTG ATGAACTTTC TCAAGACTTT GATCTTAATG AACCTCAAAG AGAGGGACAA CGCAGACGCG AAAGCAAGGT GGCTCGAGAA ACAAACATCT AATCCATCAG AAGAATGGGA ATCACAACAC TCTGAGATAT TAAGCCCTGA GAAACCCAAC AATAATAACC CTAAGTTTTT GAGAGTGGCT ACTCTGTGTA GGCTAGAGGC TGACAATGAA GAAAAGTTTT GGAACATAAA GAAGAGAAAC GATCATGAAG CTGTTTTAAA TACTTCATCG GGTAATGAAA ACATCGGACC GGTACAAAGG TTATGTAAGC ATCCACTGTT TCAGTTAAGC AAATCCACAA AGAAAGCTTT TGTAAGTAAT CGAGATGAAG GAAGGAAAGG ACGAGAAGCT TGGAGTTCAC GTCTCTCTTC TTTGCCTTGG TAAAATTTTC TTACCTCACT TTATTTTTCA TGTTTTTGAG AGTGTAAAAA ATATTGTGAA ATATGATTAT AGGTGTTAGT TGTTTGAAAT AGGGATAAAT TTATATCCAA TCAATTCAGA AATGGAAACA AATGTATGCT AGTTCTTGTC TAAGAGAAAA CTCATGTATA CTCTATTCAC AAAAACAGAG C 
Length1561
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21531331.. 21534105
Download Sequence
A.thaliana
AGI-codeAT2G46710.1
DescriptionRho GTPase activating protein with PAK-box/P21-Rho-binding domain
TAIR curator summary
Alias[ROPGAP3][ROP guanosine triphosphatase (GTPase)-activating protein 3]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg934869 expansin A8
7.74597 Ahg473497 GT-2-like 1
8 Ahg917292 Leucine-rich receptor-like protein kinase family protein
8 Ahg478021 Pectin lyase-like superfamily protein
9.79796 Ahg472083
11.4891 Ahg473445 lsd one like 1
11.7898 Ahg893447 domains rearranged methylase 1
12.083 Ahg318449 Pectin lyase-like superfamily protein
13.4164 Ahg480389 3-ketoacyl-CoA synthase 8
14.6969 Ahg484057 Auxin efflux carrier family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression