| Annotation |
|---|
| Description | jgi|Araly1|473628|fgenesh2_kg.1__3582__AT1G31480.1 |
| Sequence |
GCTGTCACTC TTCTTTTTCA AACGACCTTT TTGTTTGTTC CTTCTTTCTA ATTCTCCTCT CGCGATTTAG CTTTCATCAA ATCAAAAATC TCTAATCTTT CTGTTAATTC TCGTCTAAAG CTCCCTCCTT TAACCCTCTC TGTATCGTGA TGGAAGATAG AGAGGCACGT TTAGGAACTC GTGAGGTTAA TGAAACATCT CCTGATTTGT TGAAGAATAC GCCTTCGAAT ATTGCGAGGT TGGAAGATGT GATTGAGCAA TGTTATGGTA GACAAAAGTA TCTTGCTCAG ACCAGAAGTC CTTCTGATGG GAGTGATGTT CGGTGGTACT TTTGTAAGGT TCCTTTGGCT GAAAATGAAT TAGCTGCTTC AGTACCTCGC ACTGATGTAG TAGGAAAGAG TGAGTATTTC CGTTTTGGTA TGAGGGATTC TCTTGCGATT GAGGCATCTT TCTTGCAGAG AGAGGATGAG TTGTTGTCAC TCTGGTGGAA AGAGTATGCA GAATGCAGCG AAGGCCCGAG ACCACAAGTT AATTCTAAAA AGAAATCAGT TAAGCAGTCA ATTGAAACTC CTTCAGAATC TTCTGTGTCC TCTAGTCTAT ATGAAGTTGA AGAGGAGAGA GTCGGTGTAC CTGTTAAGGG TGGGCTATAT GAGGTGGACT TGGTGAGGAG GCATTGTTTT CCAGTGTACT GGAATGGAGA TAATCGGCGT GTGCTTAGGG GTCATTGGTT TGCTCGTAAA GGTGGCCTAG ACTGGCTTCC AATTCCAGAA ACTGTTTCTG AGCAGTTGGA GGTTGCATAT CGTAACAAGG TTTGGCGAAG AAGAAGTTTT CAACCCTCTG GGCTTTTTGC AGCTCGTATT GATTTGCAGG GTTCTAGTCT GGGACTCCAT GCTCTTTTTA CTGGTGAGGA TGACACCTGG GAAGCGTGGC TTAATGTTGA TCCTTCTGGG TTCTCTGGCA TCGTTGGATA TACTGGGAAT GGAATTAAGT TGAGACGTGG TTATGCGGGC TCCTACTCTC CAAAACCTAC GCAGGAAGAA CTTCGCCAAC AAAAGGAGGA AGAAATGGAT GACTATTGTT CTCAAGTCCC TGTTCGGCAT CTTGTATTTA TGGTTCATGG TATTGGCCAA AAAGGAGAAA AGTCCAATCT TGTTGACGAT GTTGGAAACT TCCGTCAAAT CACGGCAGCT TTAGCGGAGC GTCATCTAAC CTCTCATCAG CTCAGCACTC AACGGGTCCT TTTCATCCCA TGCCAGTGGA GAAAGGGTCT AAAGCTAAGT GGTGAAGCTG CTGTTGATAA ATGTACTTTA GATGGTGTAC GGCGTTTTCG AGAGATGCTG AGCGCAACTG TTCATGATGT GTTATACTAC ATGAGCCCCA TTTATTGTCA AGCTATAATT GACTCGGTTT CAAAGCAGCT GAATAGACTG TATCTAAAAT TTTTAAAGCG GAATCCAGAC TATGTCGGAA AGATTTCCAT TTATGGACAT TCTCTGGGGA GTGTTCTCTC CTATGACATC TTATGTCATC AACACAACTT GTCATCCTCA TTTCCAATGG ATTCAGTATA CAAGAAATTT TTTCCAGATG AAGAATCTCA TCCAACTCCA GCCAGCGCTG ACAAACCTTG TAGTTCACAT CCATCATCAA ATTTGGAGCC AGAGAAATCT AACCAGTTGA ATAACACCGA GGAAATCACA GGTCAAGATA ATAACATGGT GGCTGAAGAA TCAACAGTAC TGGAACATCA CGATGTCATC CAGGAAGCTC CTTCACTGAT CTCTGATTCT GTTGTGGACA ACGTGGGTTT GGGAAGAAGA AGCGGCCAGG AAGATGACCA TCATGATTCT AGTGGTGCTA TATCCTCACA GGATGGACCA GATGGAGCGG ACTGTAGAAC GCCTGATTCT CCATCGTGTT CTCAAGAACA ATCATGGGAT AAAGAAAGTG TCAATTCTAA TAATGAGGAG ACAATCAAGT TGTTACAAGA AGAGGTCAAC TCATTGAGGT CAAAAGTAGC ACAACTGCAA TCAGAGAATG CCAGAATATT GTCGGATGAA AAAGCCAAGG CATATGTGGT GCCTAAGCAG CTCAACAACG AGATGGCATC AACTAAAGAT GCCAATGCAC CTACAAGCCT TACTCCTTTT ATCAAGTACC AAAAGCTTGA GTTCAAGGTT GACACTTTCT TTGCAGTTGG GTCTCCTCTT GGAGTTTTTC TCGCCCTTCG AAATATACGT CTTGGGATAG GTAAGGGAAA AGATTACTGG GAAGAGGAGA ATGCTATTGA AGAGATGCCA GCTTGTCGTC GAATGTTCAA TATCTTTCAC CCCTATGATC CTGTTGCGTA TAGATTGGAG CCACTTGTCT GCAAAGAGTA CCTTCCCGAA CGACCTGTTA TTATTCCCTA CCACAGAGGG GGCAAGCGGT TGCATATTGG ACTACAGGAT TTCAGAAAAG ATTTTGCTGC ACGTTCACAG AGAATAATGA ATCATTTTGA TTCAGTAAGG ACTAGAGTTC TCACTATTTG TCAATCCAAA AGTGCGGATA ACCTAGACGA GATGGAAGAA ACTGATGACG AAAAGGATGG AAGGTCCTAC GGTTCCTTAA TGATGGAGAG ATTAACTGGA ACTCGAGACG GTCGAATAGA TCACATGCTC CAGGATAAAA CCTTTGAGCA TCCCTATCTA CAAGCAATAG GAGCTCATAC GAACTATTGG AGAGATCAAG ATACTGCTCT TTTCATAATT AAACACTTGT ATCGCGAGTT ACCAGACGGA CCAAACTCAC CCACGGAATC CACCGAAGGA GATGATAGTC CAAAAGACTC AAGTAGACCT CATAGCTGGA TAGACAGAAG AGAGACTGAT TATGATGATG AAGAGCTTCC TTTAACATTC TCCGACAAAC AAATCGCTAG AAGCTTCTCC GCAGAAGCCA AGAAATATTT GAAGAAGCCT TAAGACTTTG ACCATAGGTT TATATCGTAA ATCCGGTGAA AGCTCCCTGA TTTTGATTTT GTTTCCTGTG CAGAAGTAAC ATATAGTGCA GAAAATGTGA AAAGGAAAAA CTCCTACATG GTTTTGCCAC ATTGTAACCA TAATTTTACA GATAATAAAG CAAAACGATG AAAGCTT |
| Length | 3137 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 15836650.. 15842490 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G31480.1 |
| Description | shoot gravitropism 2 (SGR2) |
| TAIR curator summary | encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole. |
| Alias | [SGR2][SHOOT GRAVITROPISM 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg320274 | Transcriptional factor B3 family protein |
| 14.2127 |
Ahg477663 | |
| 22.5167 |
Ahg481406 | DNAJ heat shock N-terminal domain-containing protein |
| 23.3666 |
Ahg482628 | ENTH/VHS family protein |
| 25.219 |
Ahg488435 | prenylcysteine methylesterase |
| 28.1425 |
Ahg485071 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
| 30.3645 |
Ahg318360 | Glycosyl hydrolase superfamily protein |
| 33.9411 |
Ahg495958 | HEAT/U-box domain-containing protein |
| 40.2865 |
Ahg471045 | NAD(P)-binding Rossmann-fold superfamily protein |
| 42.4971 |
Ahg478006 | multifunctional protein 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|