Detail



ID : Ahg485071

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485071|fgenesh2_kg.5__1063__AT3G46920.1
Sequence
ATGGCACATG AACCCAGTAG CCCAAGTTCG AATCTTGTTC ATAATCCGGC GAATCTTTCA GATTATGGGT TAAATTATGG CTCTGATTTG AGCAATAAGC GTGTCTCTGA TGGAATCATT ACTGGGTTTG GGAGTGAGCA GGTAAGTATT GATGCTACGA ATAGTAACAA TCCAAATTTA TCAAGTAGTG ATATGGATGG TGAAGAAGGG GAAAAGGTGA AGTTTTTATG TAGCTACAAT GGAAAGATAA TGCCTAGACC AAGTGATGGC ATGTTACGAT ACGTTGGTGG TCAAACAAGG ATCATTAGTG TTAAAAGGAA TGTGAGATTT GATGAGTTTG AGCAAAAGAT GATTCAGGTT TATGGTCAGC CTGTTGTTGT TATTAAGTAT CAGCTTCCTG ATGAGGATCT TGATGCTTTG GTTTCTGTCT CATCTAGTGA AGATATTGAT AATATGATGG ATGAGTTTGA CAAGTTGGTT GAGAGATCTT CTGATGGGTC AGGGAAGTTG AGAGTTTTTT TGTTTGATGC TGCTTCATCC GAGGTTGATG ATTCTTTCGG AATATCGCAG TATGGAGTTG ATATTGGGCA GAGGTATGTA GAGGCGGTGA ATGGTGTTGT TTTGAGTAAG GAAAGTGTGG CTAGTGGTAG TAGTTCTAAT CCGAATTCTG ATTTTAGTGG CGTGGATGTT GTTGATAGCT TGGCTGTAGG TCAGAGTGAT TTTGTTGCAA CTACCTGGAC CTCGAGTACT TTCTCACCTC ACACTTATCA TAGTAATGCA CCAAGACTTG TTCCTCCTGA TCCTCGCTCC TCTGCTTATG TTTTGCCAAT GACTGTTCAA GCCGATCCGT TTCATTCTTC TCAGCTTGAG TCTGTTTCAG GGAAACAAAT ACTTGGTAAG ATCCAGCAGC ATCAACAGGT GCATGACTTG CAGCAATCAA TGACTACGCC ATCTGAGCAT CATTCACCGA CTTATGTTGA ATCTCGCCAA GAAGCTTTAA AACAACCAGA TGTTGTTCAT TCACCTATCC AGCTTTTGCC AAGTAGTACT TCTTTGTTCT CCCAACAACC TTTTCAAGGT AGTACTGTAG GTGTCTCATC CCACCAGTTC CTTCCTGCTT CTCACATGTC AATGGCTCCT TTGAACGCTC AGGTTGGTGC TACACCAGTT TTGATTAACC CTATACTACA AACCCAAGAA AATCTGTTGG GGAACTATCC TGCTGAAAGA AATGTCGGGA TTCAAAAGGT AGCCCCGCTT CCTACAGAGC CGAGATACAC TGCATATCAA GGTACGATTG CTCCTGGTCT ACCAATTGGT GGTTGTGGCG GGTCTCAGGT TCCACCATCT AACTATGTTG TTCTCCCCGA TGGTGGTTTG CATCAACAAG TAATTATGCC TGAAAGTTTT CAAAGGGTAG ATGATTGTCA TATGTGTCAG ACATCTTTTC CTCATATGCA TTCTGATCCC ATTATACGGG AGAGGAATGA TGGCTCTACA ATGTCGGTAC CATATGTGAG ATCAGCTTTC CATGCTTCTC ATCCAGATGA TATCATGAGA GTCCAACAGA CGGATAAGTT AACGGGTCAA CAAAGCTTCC TCAATCATTC AAATCATCAA GAAAGAGATA CTTTACATAA CGCCAATGTT GTGACTGCTC AGCTCGAGAC TACTGAACCT TTCCTCAATG AGATCGTGAG AGATGTTCCG ATAAAAGTTC AAGTATCTAG ACAGCAGCAA CATCCCGTAG ACCCTTCAGT AGCATATGCT CAATACCGAG AACTAAGTGG ATTGGTGGAT GATGTTAACA TACATGCTCC CGGAATATAT AGCAATTGTC AGAATTTCAT CTCACCGGTT GACAAAATTG GAACAGAAGA TATTATGGGT ACAAGTTCTC ACCAAATGGC AAGGAAGAAT ATGTTGTCAC AAGGCAAAGT CGTCCCATCT CCACTAATAG TTCTTCCAGG CCATGAATCT CAGCCTAAGG CATCATTGCC GCCAACACAG TCGCCCTTAT TAGGAAATCC TGGTTTGTAT CTACAATCAT TGGTTGGAGG TCAGCAGTGC GATTCAGTGG AAGCGCAGTC CAGCAACCCC GCTTATGACG TTGTTGAATC TACCTTTGAT GCTGCTAACT TACCCTCATC TTTATCATCA AATCCTGATG CTGCTAATTT ACCATCATCC TTGTCATCTA GTGTTGGTGG TGCAGACCAT AAAGATTCAT CAAAATCACT TTTTAGCAAC CAGGACCCGT GGAATTTGCA AACTAACTCA AAGGAGGATG TCAAACCTGA TCTACTTAGT TCTTCGAAAG GTGAGAATGA CTTTCATGAT TATCTGTTGA TTGGTCTTTT GTTCTCTCTG AAAGGCTCAG CGGAGGAGCA CATCAAACAA GAACTTCGGA ATGTTGCTGA AGGAGTCGCT GCTTCTGTGT TACAGTCAAG CACATCTTCA TATCTTGAAC CTACAATCAG CGTGGATGAG TATCCTTCTA ATTCGAAAGG AGAAGTTTCA CGTAATGATG AAATGAAACA GCAGTCTACT ACACAGTTCA AGAATATCAG GAACCAACTT CTAGAAAGAC TGAATTTCGG ATATTCTGGT TCTGATTCTC TGGATCAGTT GCAGATTATA AAGGACAGCG ACCTTGAACA ATTGCGAGAA CTAGGATCTG GCACATTTGG CACAGTTTAT CATGGGAAAT GGCGAGGCAC TGATGTTGCA ATCAAAAGGA TCAATGATCG ATGTTTTGCT GGCAAACCAT CTGAGCAAGA ACGAATGATT GATGACTTTT GGAATGAGGC ACAAAACCTA GCTGGCGTGC ATCATCCTAA CGTCGTTGCT TTTTATGGGG TTGTGCTGGA TTCACCTGGA GGTTCTGTGG CAACGGTTAC AGAGTATATG GTCAATGGTT CTTTACGAAA TGCGTTGCAG AAGAATGTGA GGAAATTTGA TAGGCGCAAG CGTCTGTTGA TCGCGATGGA CATAGCTTTT GGGATGGAGT ATTTGCATGG AAAGAAGATA GTACACTTTG ATCTTAAAAG TGACAACCTA CTCGTTAATC TCAGAGATCC TCATCGCCCA ATTTGCAAGG TTGGGGATTT GGGTCTCTCA AAGGTGAAAT GTCAGACATT AATATCAGGT GGTGTTCGGG GAACACTTCC ATGGATGGCA CCCGAGCTTC TAAATGGAAT CAGTAGCCTT GTTTCTGAGA AGGTCGATGT GTTTTCATTT GGAATTGTCC TCTGGGAACT TTTCACCGGT GAAGAACCTT ACGCCGACTT GCACTACGGG GCGATCATAG GTGGTATCGT TAGTAATACG CTACGGCCGC CAATTCCCAA CTTCTGTGAC ATGGACTGGA AATTGTTGAT GGAGAGATGT TGGTCTGCAG AACCATCAGA GAGGCCAAGC TTCACTGAGA TCGTGAACGA ACTACGGACC ATGGCTACAA AGCTTCCTTC CAAAGAGCAA GGATCAACAC AAGGAGCACA ATCTTAA 
Length3507
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12348689.. 12353130
Download Sequence
A.thaliana
AGI-codeAT3G46920.1
DescriptionProtein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.69536 Ahg479366 nucleolin like 2
20.347 Ahg471118 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
20.9762 Ahg490498 shaggy-like protein kinase 32
21.1187 Ahg489570 long-chain acyl-CoA synthetase 7
25.923 Ahg481281 LJRHL1-like 1
28.1425 Ahg473628 shoot gravitropism 2 (SGR2)
32.311 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
32.4962 Ahg314946
32.9848 Ahg936770 RS2-interacting KH protein
34.4674 Ahg476195 MMS ZWEI homologue 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression