Detail



ID : Ahg473805

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473805|fgenesh2_kg.1__3759__AT1G44170.2
Sequence
GGCACGAGCA ACGTCAATAT CTCTATGAAA AGAATATTTA TTTTCTTGAT TCAACAAATT TTTCTCGGGA TCCGAACTCA ATATTTGTTC TCTTCTCTCT TCTCTCTCTT TCCCGTGATT GCTGTGTTAA TAATTTTTTT AGTTTTTAAA ACACTAAAGA GAGGTTTTGA GGAATGGCGG CGAAGAAGAT GTTTGGAGCG GCGGATGCGA GTATTTTGGT GACGGGTCTT AGTCGGAGTT TTGATGATGG TGTGACTCGT GTGACTCTTA AACGCATTAG CCAAACCTCT ATAATTGGAT TAACATATCC CCCTACTTGG TCGGTCTCAT TATTGTCTAT GACCATAGTT GCAACGTCGA TGATGTTATG TGTCGACACG TGTACAACAC AACTTCAATG TAACTTTTTT GATAAGTTAA GAGTAGTATC TTTACTGAGA AACTCTATCA AGTTAGCTCT TAAGCAGCTA AAGAACTGGA TGGCGCCGGA GAAGGCCAAA ACTTCTCTAA CAACGTTTCC TGCATCGGCC GAGATTGTGT CTGAGCCTCT TGGTGTTGTG TTAGTTATCT CGGCTTGGAA CTATCCCTTC CTGTTGTCTA TTGATCCTGT TATTGGTGCG ATTTCTGCTG GGAATGCTGT TGTCTTGAAG CCATCGGAAT TGGCTCCAGC TTCGTCTGCT CTGCTTGCGA AGTTACTGGA ACAGTATCTT GATTCTTCTG TGGTGCGAGT TGTCGAAGGA GCTGTTACTG AAACAACTGC TCTGCTGGAG CAGAAGTGGG ACAAGATATT CTACACAGGT AGTTCAAAAA TTGGGCGTGT CATAATGGCG GCAGCTGCGA AGCATCTTAC ACCGGTTGTT CTGGAGCTTG GAGGAAAATC GCCTGTTGTT GTAGACTCGG ATACCGATTT GAAAGTTACT GTGAGGCGGA TAATCGCAGG CAAATGGGGT TGCAACAACG GACAGGCGTG CATTTCGCCA GACTATATCT TGACGACAAA AGAATATGCT CCAAAAGTGA TTGATGCCAT GAAGAAAGAA TTGGAGACGT TTTATGGGAA GAACCCTATG GAGTCTAAAG ATATGTCACG TATCGTAAAC TCGACTCACT TTGATCGCTT GTCTAAGCTG TTAGATGAGA AGGAAGTTTC TGACAAAATC GTCTACGGTG GTGAAAAGGA CAAAGAAAAT CTGAAAATCG CTCCAACAAT CTTGCTCGAT GTACCATTAG ATTCTCTGAT CATGAGTGAA GAAAATATTT GGCCCTCTCC TTCCAATTCT CACGAGAGTT TTGATATGAT TCGCTCTCGA CCTAAGCCAC TTGCTGCATA CTTGTTTACT CATAACAAGA AGCTGAAAGA GAGATTTGCA ACGACAGTCT CCGCTGGAGG CATAGTGGTC AATGACATAG CTGTTCATCT TGCACTTCAC ACATTGCCAT TCGGAGGAGT TGGCGAAAGT GGAATGGGTG CTTACCATGG TAAATTCTCA TTTGATGCTT TTAGTCACAA GAAGGCTGTT CTCTACAGAA GCCTTTTCGG TGATTCAGCA GTCAGGTATC CGCCTTACTC GAGAGGAAAG CTTAGATTGT TAAAAGCCCT TGTCGATAGC AATATATTCG ATATATTCAA AGCTCTTCTC GGTTTATCTT AAACGGTAAA AATATGTTTT GGTTTTGTGG GGATGAATAT TGAAGTCGAT AAATAAAAGT TTTCGGTTGA TTATGGAAAC CGGTTTCTTC 
Length1740
Protein Sequence
Protein Residue
Map Locationscaffold_2: 11800181.. 11803988
Download Sequence
A.thaliana
AGI-codeAT1G44170.1
Descriptionaldehyde dehydrogenase 3H1
TAIR curator summaryEncodes a protein similar to the aldehyde dehydrogenase cp-ADH from C.plantagineum. Constitutively expressed at low levels.
Alias[ALDH3H1][ALDH4][aldehyde dehydrogenase 3H1][aldehyde dehydrogenase 4]
Gene coexpression
MR
MR Locus Description
28.1603 Ahg487900 RING/U-box superfamily protein
32.8634 Ahg352273
33.2265 Ahg472324 RNA-binding (RRM/RBD/RNP motifs) family protein
37.229 Ahg488204 pheophytinase
52.6498 Ahg488124 WRKY DNA-binding protein 75
52.7636 Ahg473967 Thioesterase superfamily protein
56.7627 Ahg339633 Tetratricopeptide repeat (TPR)-like superfamily protein
63.7809 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
66.0908 Ahg484196 Galactose oxidase/kelch repeat superfamily protein
72.9931 Ahg475086 Flavin-binding monooxygenase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression