Detail



ID : Ahg487900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487900|fgenesh2_kg.6__1034__AT5G10650.2
Sequence
ATCTACGATC ACACAATCAT CAGCTTTGTA GCTTGATGTT TATGATTCAT CAATTGTTTT CCTCTGGATG ATCTATTATC TTCCTTCATG TTGTTTCCGG AAAGTGTTTC TTTGATTCAT GGATGGATGT GCGGGTAAAC GATCTGTTGA CCGGTTGGTT GTGCCTCGGA AAGCTACTGG TCTTATCCTG CGTGACAATA TGAACAAGAC AGATGGTAAG ACTGTTCCTT TCTGCAGCCG AGTTGGTTGT AGTGCAAAGG TAACTTCTAC CAAGAGATCC CGGATTGGCT CTACGGACAA CAATTCAAAA GTTGCTCTGC CTCCGGTTCC CTCTTCCTCA CATGGAAAGG AAATTGTTGG GAGTTCATCT CGAACTCCTG GTGGATTTGG ATACTTAAGA AAGACAGCCA AAGTTACTCC CAGAAGAAAG CCGTCATCTA GTTTAGACAC AGAATCTTCG GAAAAGACTA GTATTCATTA TGATCCAGCT GCAACAGAGC CTACACTTCC ACGCCAAAAG ACTAAAAGAG GCACAATCAA TGTTCATCCT CAAAGCGCTT TCTCTGGAGA AGTCGTGTTG ACAAAGGCAG GAAGCTCAAG TAGAGGAACC AGCAGAAGTA GTCATCAGAA GTCTGAATTG GGCACCCGAG ATACTCTGAC GGGTCCTTCT GTTTCTACAT CTTCTGATAA CAGCGAGCAC ACTGTAAGAG GCGGTTTGAG CAGGAATAGA TTGAGGAACT TGAGGTGCAA TTCTGTGTCT GATGTTCTTC CAACTAACTC AAACTCAGCA ACAAAAATCA GTGTGACTAA AAAGAAGAAA AACTCTGATG GAGAGAGCAG CTCCTCTAGC AAAGGCAGTA AGACTTGTGT GTTGGTACCA AAGGTAAGGA GTCAAATTTC TTCTCATGGC AATGGCATCA CAGTTTCTGA TAACAGAAGA AATCGAATAG TACCAAGTAT TAGGGACAGC AGTGTTGGTT CAGGTGGTGG TAGGAGATCT GGTTATATTG GTAGATCAGA GCAACTTGGA GCTGTTGCAT CCTCTGCTAC TTCTCGACAA ATGCCTCACC CTGCAACACC AACTGATCCC AATCCTTCTC TTTCGTTTTT TCCATCAGAT AGATACAGTA GGCCAAACAG TAGTACTGGA CGTGTACATA GCACGATGCC TGGTAGCCCC ACGGAAGCTG ACCCTTCAAA CTCTTTGGTG AACCGGGATG GTTTGAGTCA CTACAACATG AATGGTATTG CAGAGGTATT GTTGGCCCTG GAAAGGATTG AACATGATGA AGAGCTTACA TATGAGCAAC TGGCTTCTTT GGAGACCAAT CTATTCTCAA GTGGTATGTT CAGATTCTAC GATCAGCATA GAGATATGAG GCTTGACATT GATAACATGT CATATGAGGA ACTACTAGCT TTGGGGGAGA AAATGGGTAC AGTGAGCACA GCTCTAAGCG AAGAAGCACT CTCGAGAAGC CTCAAGCAAA GCACTTATCA GAAGACAGAT GAAACCGGTT CCATTTCTCT GAGTAAGGAA GATGATGTCA AGTGCAGTAT TTGCCAGGAA GAGTATGTTG ATGGAGATGA AGTAGGGACT ATGCCATGTC AACATATGTA CCATGTGAGC TGTGTACAAC AATGGTTGCG GATGAAGAAT TGGTGCCCAA TCTGCAAAAC CTCTGCGGAA GAGGAGAAAT CATTTTAGTG AATAATGCCA ACACCAGTTT TAGGTTTGTG GGATGACTCC AAGATGATGC AGATACATTG CTTTTGTCTT CACAAAGTGC TTGTCTCTAC ATCATCTTGC TCTCTCTCTC TCTTTTCTTT TGTACATATA ACAATATCTT TCTTTTGACC CAATTGGGTA CAAATGGGTA AATAAGATCA GGTGACCATA TCCTTCTCTT TCTGTATTAA AAGCTCAACT TTTGATTTAA ACCTGAAACA TTTTTTGGTT TATAC 
Length1965
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4091980.. 4094575
Download Sequence
A.thaliana
AGI-codeAT5G10650.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.61577 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
14.3875 Ahg946673 response regulator 2
14.9666 Ahg475116 WRKY family transcription factor
15 Ahg921070 PLATZ transcription factor family protein
15.0997 Ahg492857 VACUOLAR SORTING RECEPTOR 7
17.2337 Ahg486058 Ca-2+ dependent nuclease
18.4932 Ahg493908 Domain of unknown function (DUF23)
20.3715 Ahg922573
21.5407 Ahg475258 NAD(P)-linked oxidoreductase superfamily protein
21.6102 Ahg483774 BTB/POZ/Kelch-associated protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression