| Annotation |
|---|
| Description | jgi|Araly1|474191|fgenesh2_kg.1__4145__AT1G50600.1 |
| Sequence |
TTATTATTCC CCTGGTGGAA AGTAGGCAAG CAAGCAAGTG GTATCATCAA CAAACAAAGC ACTTCTCCTT TGATTCTCTC TTTACCTTGA AGCTTCAAAA TCAAAATATC AACCGAATAT CTGTTCGTTG AAATCTCGAA GAATCTCTCA AACTCAGTCT CAAATCTGTC TCTCTGCAAA CTATCAACAA CCAGATAATT TAGATATGGA AGCTACTCAG AAACATATGA TTCAAGAAGG ATCTTCAATG TTTTACCATC AACCATCTTC AGTCAAACAA ATGGACCTTT CTGTTCAGAC ATTTGATTCT TACTGCACAC TTGAATCCTC TTCAGGCACC AAGTCTCATC CTTGTCTTAA CAACATCAAC AATTCTTCTT CAACCACAAG CTTTTCCTCT AATGAAAGTC CTATTTCGCA AGCCAACAAC AACAACTTAT CGCGGTTTAA CAATCATTCC CCTGATGACA ACAACAACTC TCCGTTGAGC GGTTCTTCCG CGACAAACAA CAACGAGACA GAGCTTAGTC TCATGCTTAA AGATTTGGAG ACTGCAATGA TGGAGCCTGA TTTAGACAAC AGCTTTAACC ATCAAGGCGG GTTTGGACAG CAACATAGAG TTGTTTCTTC AGCTATGTAT AGATCTATGG AGATGATCTC TAGGGGAGAT TTAAAAGGAG TGCTCTATGA ATGTGCTAAA GCTGTTGAAA ACTATGATTT GGAAATGACT GATTGGTTGA TTTCTCAGTT ACAGCAAATG GTTTCTGTTT CTGGTGAGCC TGTTCAGCGC TTAGGAGCTT ATATGCTTGA AGGGCTTGTT GCTCGGTTGG CTTCTTCGGG TAGCTCCATC TATAAAGCTT TGAGATGCAA AGACCCTACG GGTCCTGAGC TTCTTACTTA TATGCATATC TTGTATGAAG CCTGCCCTTA CTTCAAATTC GGTTATGAAT CTGCTAATGG AGCTATAGCT GAAGCTGTGA AGAACGAAAG TTTTGTTCAC ATTATCGATT TCCAGATTTC TCAAGGCGGT CAATGGGTGA GTTTGATCCG TGCTCTCGGT GCTCGACCTG GTGGACCTCC GAAAGTTAGG ATAACGGGAA TTGATGATCC AAGATCATCG TTTGCTCGAC AAGGAGGACT TGAACTAGTT GGACAAAGAC TCGGGAAGCT AGCGGAAATG TGCGGTGTGC CGTTTGAGTT CCACGGAGCT GCTTTATGCT GTACGGAAGT CGAAATCGAG AAGCTAGGAG TTAGAAATGG AGAAGCGCTT GCGGTTAACT TCCCGCTTGT TCTTCACCAC ATGCCTGATG AGAGCGTAAC TGTGGAGAAT CACAGAGATA GATTGTTGAG ATTGGTCAAA CGTTTGTCGC CAAACGTCGT GACTCTGGTC GAGCAAGAAG CGAATACAAA CACTGCGCCG TTTCTGCCCC GGTTTGTCGA GACAATGAAC CACTACTTGG CAGTTTTCGA ATCAATCGAT GTGAAACTCG CAAGAGATCA CAAGGAAAGG ATCAATGTTG AGCAGCATTG TTTGGCTAGA GAGGTTGTGA ATCTAATAGC TTGCGAAGGT GTCGAAAGGG AAGAGAGGCA CGAGCCACTC GGGAAATGGA GGTCTCGGTT TCACATGGCG GGGTTTAAAC CGTATCCGCT GAGCTCGTAT GTGAACGCAA CAATCAAAGG ATTGCTTGAG AGTTACTCAG AGAAGTATAC TCTTGAAGAA AGAGATGGAG CATTGTATTT AGGATGGAAG AATCAACCTC TTATCACTTC TTGTGCTTGG AGGTAGGTAA CAAATTTAAA CTTTGCTTTT TCGAGAGATT AGGAACTTCT TTTACAGTTT GCAGAATATG TTTGTAAAAG TAAAACTCAT GCATGATCCG AAGGAACAAG TTGTCAAATT AATGTTGTAG TAGTAGTAAG TGTTGTTGAT GATCCCATAT ATGTTGAAAG TTTATGTTTT TTTCTTCACA AGAAACTATG ATTTGACATC TTTATGATGT TATAAATTAA TGAGATAT |
| Length | 2018 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 25208881.. 25211294 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G50600.1 |
| Description | scarecrow-like 5 |
| TAIR curator summary | Encodes a scarecrow-like protein (SCL5). Member of GRAS gene family. |
| Alias | [SCL5][scarecrow-like 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg928240 | Serinc-domain containing serine and sphingolipid biosynthesis protein |
| 4.89898 |
Ahg326902 | |
| 4.89898 |
Ahg905826 | zinc-dependent activator protein-1 |
| 7.07107 |
Ahg313679 | multidrug resistance-associated protein 13 |
| 7.14143 |
Ahg471776 | |
| 7.48331 |
Ahg474620 | RNI-like superfamily protein |
| 10.9545 |
Ahg482914 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
| 11.3578 |
Ahg478085 | |
| 12.5698 |
Ahg493270 | associated molecule with the SH3 domain of STAM 3 |
| 13.2665 |
Ahg490336 | exocyst complex component sec15B |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|