Detail



ID : Ahg474196

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474196|fgenesh2_kg.1__4150__AT1G50640.1
Sequence
GCTTTTTGTG TTGAAGAGAG AGTTTCCTAT CTTCCCCATT CCTCCCACCA TCTCCCTAAT CTTCTTCTTC TTCCTTTCTC TCTCTTTCTC CATTACCATT ACTTCTGGCT TTCTCTTAAA TCCACTACCA TGAGGAGAGG AAGAGGCTCT TCCGCCGTCG CCGGACCTAC CGCCGTTGCC GCCATCAACG GATCTGTTAA AGAAACACGA TTCAGAGGCG TTAGGAAGAG ACCTTGGGGA CGATTCGCAG CTGAGATCCG TGATCCATGG AAAAAAGCTC GTGTCTGGTT AGGTACTTTC GATTCCGCCG TCGAAGCTGC TCGCGCTTAC GACTCCGCCG CTCGTAACCT CCGTGGTCCA AAAGCCAAAA CTAATTTCCC GATCGATTCT TCTTCTCCTT CTCCTCAACA ACGATTTAAT CAGATTCAAA ATCAAAATCA AAATCAAGTC GATCCGTTCA TGGACCACCG GTTATACGCC GACCATCAAC AACAGTTTCC GATCGTTAAC CGGCCGACTA GTAGCAGCAT GAGCAGCACC GTTGAATCGT TTAGCGGACC GAGACCTACG ACGATGAAAC CGGCCACGAC GAAGAGATAT CCCAGAACTC CACCGGTTGT TCCCGAGGAT TGTCACAGCG ATTGCGATTC GTCGTCGTCT GTAATCGTCG ACGACGACGA TATCGCATCG TCATCGCGGC GACGGAATCC GCCGTTTCAA TTCGATCTAA ATTTTCCACC GTTGGATGAT GTTGACTTGT TCAATGGCTC TGATGATCTT CACTGTACCG ATCTACGTCT CTAATGAATT GGTAAATCAC AGATCCGTGA TCGATTTGAT TTTAATGGAG CAAACAACAA AAATCCCTTT TTTTTTTTTT TTTTAAATTT TCTGTTTCGT TGATCTCATA TAATTTTTAC TATGCGGGAG AAATAGAAAG ACAAAGAAAC GAAGAAGAAG AAGATGGTGA TGAGCTTGAG AGCTTGAGCT GGTTCTGTGT TTCTTCTGTG ATGATATTGT AAGAGTATTA TTATTTTTAT TATTTACTAC ATCTTCAAAA TCAAGAAGAG GAAGACCGAA CACGATGATC TGTTGTGTCT GTTTGTTTTA CTGTAAGAAA AAGCAGATCT GGGTTTCGTT TTTTCTTGAG ATAGAATCTT TGTAACATAT ACATTTGGAA CACTGATGAT TCTAAATAAA ATCTAGAATC TTTTTTTT 
Length1218
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25238123.. 25239371
Download Sequence
A.thaliana
AGI-codeAT1G50640.1
Descriptionethylene responsive element binding factor 3
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Alias[ATERF3][ERF3][ethylene responsive element binding factor 3]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg478029 Sec23/Sec24 protein transport family protein
5.74456 Ahg488990 Phosphoinositide phosphatase family protein
8.48528 Ahg337633 RING/U-box superfamily protein
9.16515 Ahg479043 WUS-interacting protein 2
12.4499 Ahg493778 DCD (Development and Cell Death) domain protein
13.0384 Ahg492509 phosphatase-related
16.1245 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
19.4936 Ahg342253 NAD kinase 1
22.9783 Ahg349401 Protein of unknown function (DUF1423)
23.4734 Ahg489723 arginase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression