| Annotation |
|---|
| Description | jgi|Araly1|492509|fgenesh2_kg.7__1942__AT4G23570.3 |
| Sequence |
GATGGCTAAG GAACTTGCTG ATAAGGCTAA AGAGGCTTTC GTAGACGATG ACTTCGATGT TGCTGTTGAC TTATACTCCA AAGCCATTGA CTTGGATCCT AATTGCGCTG AGTTCTTCGC TGATCGTGCT CAGGCCTATA TCAAACTCGA AAGCTTCACT GCAGAGGCCG TGGCAGATGC GAACAAAGCA ATTGAGTTGG ATCCTTCATT GACCAAAGCT TACCTAAGAA AAGGAACTGC CTGTATGAAG CTTGAGGAGT ATCGGACTGC TAAAACAGCT CTTGAAAAAG GTGCTTCTAT CGCACCGAGT GAATCCAAAT TTAAGAAGTT GATAGATGAA TGCGATTTTC AAATCACAGA AGAGGAGAAA GATTTGGTTC AACCGGTGCC TTCGACTTTG CCTTCAAGTT CAACAGCACC ACCAGTATCT GAACTTGATC TTACCCCTGC AGCCAAGTAC AGACACGAGT ACTACCAAAA GCCAGAAGAA GTTGTGGTAA CTATTTTTGC AAAAGGAATA CCCAAGCAGA ATGTTAACAT CGACTTTGGT GAACAAATTC TGAGTGTTGT GATTGATGTT CCTGGAGAGG AGGCGTATTA TCTCCAACCG AGATTGTTTG GAAAGATTAT ACCAGATAAG TGCAAATATG AAGTATTGTC AACCAAAATT GAGATCCGTC TTGCAAAAGC CGATATAATC ACATGGGCCT CCCTCGAACA CGGCAAAGGG CCAGCAGTTT TGCCAAAGCC TAATGTCTCA TCAGAGGTTT CGCAGAGGCC AGCTTACCCA TCATCTAAGA AAGTTAAGGA CTGGGACAAG CTCGAAGCTG AAGTGAAGAA ACAGGAAAAG GATGAGAAGC TGGAAGGAGA CGCAGCTATG AACAAATTCT TCCGTGAGAT ATACCAGAAT GCGGATGAGG ATACGAGGCG AGCGATGAGC AAATCATTTG TGGAATCGAA TGGGACAGTG CTGTCAACAA ACTGGCAAGA GGTTGGGACT AAGAAAATCG AGAGCACTCC TCCGGATGGC ATGGAGCTCA AGAAATGGGA GATCTGATCT CTGATATGAT ATGATTGCAT TTGTGGGTTT TGCCTAAATC TAGACAAGTC TTAAAACCTG GTCCCTTTCT TCCTGTAATG AGGGTCCTAA GGTTTTTTCC TTTTTGCTAA ATATGGCTTT CTACTTATGC TATGTTGTGA CTTGTGAGTT ATGGTCTTTA GGACTCAACT TTTTTTGATG TTTTATTTAA ATATTCATAA TTTC |
| Length | 1264 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 7441990.. 7459157 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G23570.3 |
| Description | phosphatase-related |
| TAIR curator summary | Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance. |
| Alias | [SGT1A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg483145 | RING-H2 finger C1A |
| 6.32456 |
Ahg480033 | rotamase FKBP 1 |
| 13.0384 |
Ahg474196 | ethylene responsive element binding factor 3 |
| 23.4521 |
Ahg477486 | general regulatory factor 7 |
| 33.9853 |
Ahg929447 | ENTH/VHS family protein |
| 37.3898 |
Ahg485546 | Clathrin light chain protein |
| 40.4722 |
Ahg494266 | BAX inhibitor 1 |
| 45.299 |
Ahg487651 | serine/threonine protein kinase 3 |
| 48 |
Ahg928617 | Heat shock protein 70 (Hsp 70) family protein |
| 50.6754 |
Ahg491086 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|