Detail



ID : Ahg474326

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474326|fgenesh2_kg.1__4280__AT1G52080.1
Sequence
TTCATCATCC TCTGTTCAAG ATTTCTCCAA GTCATCAAAG TTCTCGCCGT CAAATCAAAT CATAAATTTG TAGAGAAACA TCACATTCCG TGTTTGATCA TCGGACAATG AAATAAACCC ACTCAATTTT CGTATCTGCT ACCAACTTCC TAAAACAAAA AATTTTTTAT GGCGTTTCTG ATGGAGGTTG ACGAAGAAGA AGAGAGATGA TCTAGTCTTT CTTCAGATTG AAAATTTTGG GGGTTTTTTT TTATTGGTAG TTATGAATAT GATCATTACC AAACACAAAA GAGATATAAA CTTGTTTGTG CTTCAACTAG GAGCAGCTCT TGCTGTATCT TTTGCTGGAT TTCTCTTTTC CCGATTTAGA AAGAAAACAA AAAGAATTGG ACCTACTTTG CCTCCTCTTC GACCTCAATC TTCTGATAAT GGATACAGAG ATTGTTCTAA TCAATCCATT GATAGAGGAG ATGCGGGCAC GCAGAATACT GATGAAGAGA CTTTAATCGG TTTTTCGCCA CGAAGGGAAT GTGATCTTGA TGAAGAAGAT GTGTTTCTTT TACCGGAGTT TGAAGAGGAA GCTAAAAAGT TAGATTTGTT GGTTTGTGAT GAGTGTGAAA CACCGAGGTC GGATATAACC GCTCCTTTAG CATTTCCGAG CGAAGAGGAA GCTGATTATG AGAATGAGAT TAAGCGGTTG AGAAACACGG TGAGAGCGCT GCGTGAGAGA GAGAGATGTC TTGAGGATAA GTTGTTGGAA TACTACAGCC TCAAGGAGCA GCAAAAGATT GCAATGGAAC TGAGAAGTAG ATTGAAACTA AACCAGATGG AGACTAAAGT TTTCAATTTT AAGATCAAGT CGTTGCAAGC CGAGAATGAG AAGCTTAAGG CGCAATGTTC TGAGCATTCG AAAGTTTTGT TGGAGCTTGA AAAGGCTATG TCAGAGGTTC AAGTGCTTAA GAAGAAACTG AACATCAATA CCCAACAACA CGTAGCGCAG ATCTTGTCAC TTAAACAACG AGTGGCGAGG CTGCAAGAAG AAGAAATCAA GGATGTTTTA CCTGATCCGG AAGCTGATAA GATGATGCAG AGGTTAAGGG ATTTGGAAGG GGAGATCAAC GCGCTTACGG ATTCCAACAT GAGATTACAG TTTGAGAATT TTGAACTTTC TGAGAAGCTA GAGTCTGTTC AAATCATAGC AAATTCAAAG CTTGAGGACC CTGAAGAGGA GATTGAGACA TTACGCGAAG ATGGTAACCG ATTGAGGAGT GAAAATGAAG AGTTAAAGAA GGAAGTCGAG CAGCTTCAGG GTGATCGATG CACTGACCTC GAGCAGCTCG TTTATCTCAG ATGGATAAAT GCTTGCTTAA GATATGAGCT ACGGACTTAT CAGCCTCCAG TGGGTAAAAC CGTTGCTAGG GATCTTAGTA CTACTCTAAG TCCTACTTCA GAAGAGAAAG CTAAGCAGCT TATCCTCGAG TATGCACATA GTGAAGATAA CACTGATTAT GACCGATGGT CATCTTCGCA GGAAGAGTCA TCAATGATCA CTGACTCAAT GTTTTTAGAT GATTCTTCTG TCGACACTTT GTTTGCGACG AAAACAAAAA AGTCAGGAAA GAAGAAGCTG ATGCATAAGT TAATGAAGAT CTTACACGGT AAAGATACTC AAGACCGCAA GAAGAGAGCT GGTTCATCGG AACCGAGCAG CGCAAACACG GGTGTTCATT CAACTCCTAG GAAGCTTAGA ACAACGCATT CAATGGACTT CCAAATGTTG ATGCGTGGGA AAGACGAGGA AGAAGACTTC AAGGATCACA TCAGGATGCT GCGTCATAAG AGCGAAGCAG CGGGTTCTTC CACCTATGGA GAAGAACACT GTTTGGAATC AGATCAAAAC GGGAAGAAAG AGCTGATTAA ATTCGCAGAT GCGCTTACGA AATCTCGTTC GACAAAGAAG CTTCACAAGA AATCTGTGTC CTTCTTTTTC TGAAAGTAAG TAGAAACACT TAACTTACTT GTAACTGTAA CACGCATTGC CTAAAGCTAC ATATATGTGT GTATA 
Length2065
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26383619.. 26386387
Download Sequence
A.thaliana
AGI-codeAT1G52080.1
Descriptionactin binding protein family
TAIR curator summaryunknown function
Alias[AR791]
Gene coexpression
MR
MR Locus Description
10.4881 Ahg494005 Ribosomal protein S4
14.2127 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
36.1109 Ahg911192
48.9898 Ahg473661 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
49.051 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
49.8999 Ahg891414 NB-ARC domain-containing disease resistance protein
51.7687 Ahg940749 UDP-Glycosyltransferase superfamily protein
52.2303 Ahg920195 ROTUNDIFOLIA like 17
54.5436 Ahg316070 Calcium-dependent lipid-binding (CaLB domain) family protein
56.6392 Ahg482040 Plant protein of unknown function (DUF828)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression