| Annotation |
|---|
| Description | jgi|Araly1|474506|fgenesh2_kg.1__4460__AT1G53720.1 |
| Sequence |
TGCACCTCCC TTCTTCTCTC GCACTGTTTC TGAGGTTAAA TCAAGAAGTA AACATGTCAG TTCTTATTGT GACGAGCCTT GGGGATATTG TAATTGACCT TTACCCGAAT AAATGCCCTT TGACCTGCAA GAACTTCCTC AAGCTTTGCA AGATCAAGTA CTACAATGGG TGCCTTTTTC ACACTGTGCA AAATGATTTC ACTGCACAGA CGGGTGATCC AACTGGCACG GGAGCTGGTG GAGATTCAAT CTACAAATTT CTGTACGGTG AGCAGGCTCG TTTTTTTCGT GATGAGATTC ATCTTGATTT AAAACATTCG AAGACCGGCA CTGTTGCAAT GGCCAGTGGG GGAGAAAATC TCAATGCTTC CCAGTTCTAT TTCACACTTC GTGATGATTT GGACTATCTT GATGGGAAAC ACACTGTGTT TGGGGAGATT GCCGAGGGGT TTGACACTTT GACTAGGATA AACGAAGCTT ATGTTGATGC AAAGAACAGA CCCTATAAAA ACATTAGAAT CAAGCACACA CATATACTTG AAGATCCATT TGATGATCCT CCACAGCTGG CTGAGATGAT ACCAGATGCT TCCCCCGAAG GAAAACCGAA GGAAGAGGTC GAAGATGATG TACGACTTGA AGATGATTGG GTTCCAATGG ATGAAGAACT TGGTGTTCAG GAACTGGAGG AGGTTATCCG CGAAAAGGCT GCCCATTCTA GTGCTGTTGT ACTTGAAAGT ATAGGAGATA TCCCTGAGGC TGAGGTAAAA CCTCCTGACA ATGTGCTGTT CGTCTGCAAA CTGAATCCTG TGACTGAGGA TGAGGACCTC CATACCATTT TTTCACGCTT TGGAACTGTT GTATCGGCTG ATGTAATCCG GGATTTCAAG ACAGGTGACA GTTTGTGCTA TGCGTTTATA GAGTTTGAGA ACAAGGAGGC ATGCGAACAA GCGTATTTTA AGATGGACAA TGCTCTGATC GATGATAGAC GAATACATGT GGATTTCAGT CAGAGTGTGT CAAAGCTTTG GTCACAGTTC CGGCAGAAAG ACTCCCAAAA GGGTAAAGGG AATGGGTGTT TCAAATGCGG CTCGACGGAT CATATTGCCA AGGACTGTGT GGGTGGTAAT CAGTCTTCAA AGTTCATTGT AAAAGATCAA AACAGACAGC ACGGAGGAGG TGAAGGCTAT GATATGGTGT TTGAGGGTGA TGTGCCTGAA ATCCCCAAGA GAGAGCATAG TCATGAGAGG GAGAGGAGTG AGAAGATTCA GAGGAGAAGT CCTCATGGTA ATGGGGAAGG CAAAAGACGT CACAGAGATG AAGTTGACGA TGGTAGAAGA CAGCATGATC GGGAAGACGC ACGAGAAATG GAGAGGAAAC ACAGAGAGAG AAAAGAAAGA GAGAGTAGGG AAGATGAAGA CAGAAGAAGA AGAAAACGCC GAGAAGAGAT TCGAGATAAA GAGAGTCGAA GAGAGAGAGA CGATGATGAT CATCGGAGTC ATAGAGATTA TAAAGAGAGG AGAAGAGAGA GAGACGATAG ACATGGAAGA GACGCGAGAC ATGAGAGAAG GGATAGGTGA A |
| Length | 1581 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 27341105.. 27343984 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G53720.1 |
| Description | cyclophilin 59 |
| TAIR curator summary | Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cis– trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles. |
| Alias | [ATCYP59][CYP59][CYCLOPHILIN 59][cyclophilin 59] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.583 |
Ahg483915 | Cytochrome c oxidase subunit Vc family protein |
| 11.1803 |
Ahg487239 | HhH-GPD base excision DNA repair family protein |
| 11.7473 |
Ahg932616 | Serine/threonine-protein kinase Rio1 |
| 22.8035 |
Ahg475539 | DNAJ heat shock N-terminal domain-containing protein |
| 23.1517 |
Ahg471143 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 23.622 |
Ahg946015 | proline-rich spliceosome-associated (PSP) family protein |
| 34.5254 |
Ahg495101 | cyclopropyl isomerase |
| 36.8239 |
Ahg483124 | PRP38 family protein |
| 39.9124 |
Ahg494461 | Cyclin family protein |
| 41.7133 |
Ahg473745 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|