Detail



ID : Ahg474542

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474542|fgenesh2_kg.1__4496__AT1G54115.1
Sequence
ATGAGAGCTG TGAATTTTCT ATATAGCTCG AGTAATCCCA AATTTCGGGG GATTTTTAAT GGGCTTTGTG CAATAGTCCT ATTCATCTTC TTCTTTGATC GGAGTGATAT ACTCAGGAAC CCTTTGTTAA GGAATCTGTC TTTCGTTGAT TCTAGCGGTC AATTCAGTAA TGGGTTTAGC CAGTTTACTG TAATTCGTCG ACATTTGAGT GGTTCTTCTG GTAATAGCAG CTTGAGTGGT GATACTACTG TATCTTGCTC TGGGTTACAT GAACACAGAG GTTATGTTGA TCAATGCGAG TTCTTGATAT CGAATCCGAT TTGTTCTCCA GATGGGTTCT TTGATTACCT CAAGTTCTTT TACTGCTCCT GCAGAGATTT TAAGATCTTG GGTTATTTAG TGTTAGGGGT TTGGCTTGTT GCTTTGTTTT ATCTTTTGGG TAATACTGCT GCTGATTACT TTTGTTGTTC GTTGGAGAAG CTTTCTAAGC TTTTGAGGTT GCCTCCAACT GTTGCTGGTG TTACTTTGCT TCCACTTGGT AATGGAGCTC CTGATGTGTT TGCGAGTATA GCTGCTTTTG TTGGTTCAGA TAAAGGGGAA GTGGGTCTTA ACAGCGTCTT GGGTGGTGCG GTGTTTGTAA CTTGTGTTGT TGTTGGGATT GTTTCTCTTT GTGTTGCGGA TAAAGAAGTT AAGATCGATA AGAAATGTTT CATCAGAGAC TTGAGTTTCT TCCTTTTCAC ATTGGTGGCT TTGATGGTGA TTTTGATGGT CGGTAAGGTG ACTGTTGGTA TCGCCATTGC GTTTGTCTCG ATCTATGTCC TTTATGCTTC TCTCGTGGCT GCGAATGAGA TTTTGAGGAA ACATTCCAGG AGGTTGAAGC TGGATTCTCT TACGCCTTTG CTCCCAATGC AGGGAAGTGT GTTCTCCCCA AGTGTTGAAG AGGATATTCC TATGTACAGC CCGTTGCTAG AACTTGACAC CGAGGAAGGT CCACCTCGGC TACATGATTC TCTCCCACAG TGGATGTGGG CTACAAATGT AGCCATCTAT TCAAACCATT TCGCAAAAGC CAATGTACAT GATGAAGAAA GACCTCCATG GGGATGGACC GAAGATGGTG CAGAAGTCGA GAGCTCATTA TGTTCTAAAA TCACATCTTT TCTGGAAACT CCACTGACTG TTCCTAGACG GTTGACAATC CCGTTGATTG AGGAAGATAG CTGGTCAAAG ACGTATGCGG TGGCTAGTGT CTCGTTGGCT CCTGTCCTAC TTTCTTTTCT TTGGAGCAGC CAAGATGATA CGAGTCTTCA AGCTCGGATT GTAGCCTATT TTATCGGAAT TGCGATTGGA TCTACTCTTG GATATCTCGC GTACAAAAAC ACAGAACCCG ATCGTCCACC TCAAAGATAC TTAATCCCTT GGGTACTCGG TGGATTCATC ATGAGCATCG TATGGTTCTA CATGATTGCA AACGAACTCG TTGCACTTTT GGTTACATTT GGTGGAATCT ACGGAATCAA CCCGTCGATA CTCGGTCTAA CCGTACTTGC TTGGGGAAAC TCAATGGGTG ACTTAGTGTC GAACATCGCA TTGTCGATGA ACGGTGGAGA TGGGGTACAA ATCGCATTAT CGGGTTGCTA CGCAGGTCCA ATGTTTAACA CGCTTGTTGG GTTAGGTATG TCGATGTTTC TTGGTGCTTG GTCGAAGAGT CCAGAGACAT ACATGATCCC TGAGGACAAT AGCTTGTTCT ACACTCTAGG GTTTCTAATA TTCGGATTGA TTTGGTCTCT TGTGATGCTC CCACGCAACG AAATGCGACC GAACAAAGTG ATGGGAATTG GTCTGATTGC ACTGTATCTG ATATTCGTCA CTTTCAGGCT CAGCTCCGCC ATGGGATTCA TACCTTGGGC TTCTTAAAAC GCCATTGTTG CCAGCTTATT GTATACTACT ATACATGTTG TTAGAGATAG CCACTGGTTC TGAAGTAAAT GTTGTTTGTA AATGAATCTG AGCCGTTGAA TCT 
Length2023
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27502686.. 27504770
Download Sequence
A.thaliana
AGI-codeAT1G54115.1
Descriptioncation calcium exchanger 4
TAIR curator summaryInvolved in cation (Na and K) homeostasis.
Alias[ATCCX4][CCX4][CATION CALCIUM EXCHANGER 4][cation calcium exchanger 4]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg490686 DNAJ heat shock N-terminal domain-containing protein
7.61577 Ahg914105 DNA/RNA polymerases superfamily protein
15.9687 Ahg489030 calmodulin 6
27.1109 Ahg491023 oxidoreductase, 2OG-Fe(II) oxygenase family protein
27.3861 Ahg951762 P-loop containing nucleoside triphosphate hydrolases superfamily protein
30.1993 Ahg481833 pumilio 3
31.3369 Ahg481381
32.9848 Ahg920616
43.6807 Ahg485467
51.4587 Ahg490469 Ubiquitin-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression