| Annotation |
|---|
| Description | jgi|Araly1|481833|fgenesh2_kg.4__893__AT2G29140.1 |
| Sequence |
ATGATGATAC CGGAACTAGG AAGAAGACCG ATGCATAGAG GTAACGAAGA TTCATCTTTT GGGGATGATT ATGAGAAAGA GATTGGAGTA TTACTTGGTG AGCAGCAGAG AAGGCAAGTA GAAGCTGATG AGCTTGAGAG AGAGCTTAAC TTGTATAGAA GTGGCTCTGC TCCACCGACT GTTGATGGTT CTGTCAGTGC TGCCGGAGGG CTTTTTAGCG GCGGAGGTGG GGCTCCTTTT TTGGAGTTTG GTGGAGGCAA TAAGGGTAAT GGGTTTGGTG GTGGTGATGA GGAGTTTAGG AAAGATCCGG CTTACTTGTC TTATTACTAT GCTAATATGA AGTTGAACCC GAGGTTGCCA CCGCCTTTGA TGTCTAGGGA GGATTTGAGG GTTGCTCAGA GGCTTAAAGG GAGTAGTAAT GTTTTAGGTG GTGTTGGGGA TAGGCGAAAA GTTAATGATA GTCAATCTTT GTTCTCTATG CCACCTGGTT TTGAGGCTGA GAAAACTGGT GCTTCTGCTT CTGAGTGGGA TGCTAATGGA TTGATTGGTT TACCGGGTTT GGGACTTGGA GGCAAGCAGA AGAGTTTTGC TGATATCTTT CAGGCGGATA TGGGGCATGG ACATCCTGTC GCACAGCAGC CCTCACGTCC TGCAAGTCGT AATACCTTTG ATGAAAATGT TGACTCTAAG AATAATCTGT CTCCGTCTGC ATCACAAGGT ATTGGAGCGC CATCTCCATA CAGCTATGCA GCTGTTCTGG GTTCGTCTTT GTCTAGAAAT GGAACTCCAG ATCCACAGGC CGTTGCTAGG GTGCCTAGTC CCTGTCTTAC CCCCATTGGG AGTGGGAGAG TGAGTTCAAA TGATAAGAGG AACACAAGTA ATCAAAGCCC GTTTAACGGT GTTACATCTG GTCTGGTTGA GTCTTCTGAT CTCGCCGCTG CTTTATCTGG CTTGAACCTG TCTGCAACTG GCGGGTTAGA TGAACAGAGT CAAGCTGAGC ATGATGTCGA AAAGGTCAGG AACTATATGT TTGGACTGCA AGGTGGGTAT AACGAAGTCA ATCAACATGG GTTCCCAAAC AAACCTGATC AAGCCCCTAA GGGAACTGCT TCTTGGAGGA ATTCACAGCT GAGAGGGTCA CAAGGATCTG CCTACAATGG TGGAAGTGGA CTAGCTAATC CTTACCAGCA TCTTGATAGC CCAAACTATT ATGCATTAAA TCCAGCTGTA GCTTCTATGA TGGCCAGTCA ACTTGGAACT AATAACTATC CTCCAATGTA TGAAAATGCT TCTGCGGCAT CTGCTATGGG ATTTTCTGGA ATGGACTCAA GACTTCATGG TGGAGGTTTT GTTTCTTCTG GTCAAAACCT CTCTGAATCA CGAAATATTG GTAGGGTCGG TAATCGAATG ATGGGAGGAG GTACTGGTCT CCAGTCACAT ATGGCAGACC CAATGTATCA TCAGTATGCG AGGTTCTCTG AAAATGCTGA TTCGTTTGAT CTTCTTAATG ACCCTTCAAT GGACAGGAGC TATATGGGTA ATTCATACAT GAATATGCTT GAACTTCAGA GGGCTTATCT CGGAGCTCAG AAATCACAGT ATGGTCTTCC TTACAAATCA GGGAGTCCTA ACAGCCATAG CTATTATGGT AGTCCAACAT TTGGGTCTAA TATGTCATAT CCTGGCAGCC CATTGGCTCA TCCTGGTATG CCAAATTCTC TTATGTCACC TTATAGCCCT ATGAGACGAG GTGAAGTTAA TATGCGATAT CCGTCTGCAA CAAGAAACTA TTCCGGAGGG GTAATGGGTT CTTGGCACAT GGATGCTAGT TTGGATGAAG GCTTTGGATC TTCAATGCTT GAAGAGTTCA AAAGTAACAA AACAAGAGGA TTCGAACTTT CTGAAATAGC TGGCCATGTT GTAGAGTTCA GTTCGGATCA ATACGGGAGC CGGTTTATTC AGCAGAAACT CGAGACAGCA ACAACTGATG AGAAAAACAT GGTTTATGAG GAGATCATGC CACAAGCTCT AGCCCTGATG ACTGACGTTT TTGGAAACTA TGTGATTCAG AAGTTCTTTG AGCATGGACT CCCACCACAG AGGAGAGAAT TGGGCGAGAA ACTCATTGAC AATGTTTTGC CTCTTAGCTT ACAGATGTAT GGTTGTCGTG TCATCCAGAA GGCAATTGAG GTGGTTGATC TAGACCAGAA AATTAAAATG GTGAAAGAAC TTGATGGACA TGTGATGCGA TGTGTACGTG ATCAGAATGG GAACCATGTG GTTCAAAAGT GTATCGAATG TGTGCCTGAG GAAAACATCG AGTTTATTAT TTCGACTTTC TTTGGCCATG TGGTGACCCT CTCCACTCAC CCATACGGGT GCCGTGTTAT TCAGAGAGTA TTGGAACACT GCCATGACCC TGATACACAG AGTAAGGTTA TGGATGAAAT CTTGATTACT GTTAGTATGC TGGCCCAAGA TCAGTATGGA AACTATGTTA TTCAGCATGT GCTGGAGCAT GGAAAGCCTG ATGAGCGCAC CGTGATAATC AAAGAGTTAG CTGGAAAGAT TGTTCAGATG AGCCAGCAGA AGTTTGCATC AAACGTTGTT GAGAAATGTT TGACTTTTGG AGGTCCTGAG GAACGGGAAT TTCTGGTGAA TGAGATGCTG GGCACAACTG ATGAAAACGA GCCTCTTCAG GCGATGATGA AGGATCAGTT TGCAAACTAT GTAGTGCAAA AAGTCCTTGA GACATGCGAT GACCAACAGC GTGAACTGAT ACTTACTCGT ATTAAGGTGC ATCTTAATGC TTTGAAGAAG TACACTTATG GAAAGCATAT CGTTGCCCGT GTTGAAAAAC TCGTTGCTGC TGGAGAGAGG AGAATGGCTT TGCAGTCATT AACCCAGCCT CTGGGGGCGT AAGGCCACAA GTCTTGTACA GCTTAACTAG GGTGGATGGC TCTGCCATAA CGTTTTGAGA ATTAGGTAAG ATCTAAACCA AAAATCTGCG GAGAAATTAT AAAAGAGAGC TTTGTTTTGT TCTCCGCAAA ATCTGTACAT TGTGTAGTTT CTTACCGTTT TGACTATACA TAGAACCAAA GATCCCCCTT AGGCTGATGA TGAGTAAGTG AAAAAGGCAG AGAATGGTGT AAAGAAAAAT GGTGAGGATT TTAGAGTTTT TCCTTTCACA TGTACAAAAA GAATGGCTCT TGTGCCAATG TGTAGAATGC TTTTTAGAAC AATCCCAGTT TATTTCACGA |
| Length | 3260 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 12745284.. 12749331 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G29140.1 |
| Description | pumilio 3 |
| TAIR curator summary | Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. |
| Alias | [APUM3][PUM3][pumilio 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.74597 |
Ahg478461 | Paxneb protein-related |
| 9.38083 |
Ahg950166 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
| 10.583 |
Ahg493254 | LSD1-like 3 |
| 10.6771 |
Ahg470259 | AAA-type ATPase family protein |
| 10.9545 |
Ahg951424 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 11.8322 |
Ahg923937 | regulatory particle triple-A 1A |
| 11.8322 |
Ahg941230 | Alkaline-phosphatase-like family protein |
| 13.1149 |
Ahg495970 | |
| 13.4907 |
Ahg475482 | Arabidopsis thaliana protein of unknown function (DUF794) |
| 13.784 |
Ahg347545 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|