Detail


ID : Ahg474616

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474616|fgenesh2_kg.1__4570__AT1G55550.1
Sequence
ATGGAGAGAA CAAGATCAAA ACCGATTCGG GATTTACCCG AGACAATCCA TTCGTTGCTC GGTTTGAAAT CTCATATGAC TTCTGATTGG GTTAAATCTG TGTGCAACAT CGTCAAGAAC AATTCTTCAA CGTCAAAGGA AGAAGAAGAT GACTCTGTTT CTACCGATTT ACAGAGCATT AGAGATAAAC TCTCTGCACT AACAGTTCAA GTCAATGATC AGAACAAACA GAGAAGACAG ATTCTTAATG AGTTCTTGGA CCTTAAAGGG AACATGCGTG TGTTTTGTCG AGTCAAACCC TTAGGAGCCT CCGAAAAGTT GAGGCCACCG GTTGCTTCGG ATTCAAGAAA TGTGATCATC AAGTTGTCAG AAACCAAGAG AAAAACCTAC AACTTCGACA GAGTTTTCCA ACCTGATTCA TCCCAAGATG ATGTTATCTT AGAGATTGAA CCAGTAATCA AATCGGTTAT CGATGGCTAC AACGCTTGTA TTTTCGCGTA TGGACAAACC GGTACTGGGA AAACTTATAC AATGGAGGGT CTTCCGAACT CTCCAGGTAT CGTTCCTCGA GCGATCAAGG GATTGTTTAA ACAAGTCGAG GAAAGCAATC ATAAGTTTTT AATCCACTTC AGTATGCTTG AGATTTACAT GGGAAATCTT AAAGACTTGC TTCTTTCTCA AGCAACTAAA CCCATTTCTC CAATACCTCC AAGTCTTTCG ATTCACGCTG ACGCAAGTGG AGAGATAGAG ATCGATAACT TAGTGAATCT TAAAGTAGAT GACTTTAATC AAGTCTTCAA GTTATACAAA GAAGGATGTC GAAACAGAGC AACTGCCTCC ACTAACTCTA ACTCTGCTTC CAGCAGATCA CACTGTATGA TCCGTGTATC GGTCACTTGT CTTGGAGCTT CTGAGAGACG GCGTGAAACA AACAAGATTT GGCTAGTGGA TCTTGGAGGA AGCGAGCGTG TGTTGAAAAC CAGAGCCACT GGTCTTCGTT TTGATGAAGG CAAAGCCATT AATCTCTCTT TATCCGCTCT TGGAGATGTC ATCAACTCTC TTCAACGCAA GAACTCTCAC ATTCCTTACA GGAACAGCAA GCTCACACAG GTTCTGAAAG ACTCTCTCGG ACAAGATTCA AAAACGTTGA TGCTTGTTCA TATCAGCCCT AAAGAAGAAG ATCTATGTGA AACCATATGT TCTTTAAACT TTGCAACGAG GGCAAAGAAC ATTCATTTAG GGCAGGACGA ATCAACGGAA GAACAACAGA AAAAGGAGGC TGTGATGATG AATCTGCAGA AGATGATGGA AAAGATCGAA CAAGAGCGCG AGATGTCGTT AAGAGAGATG AGAAATCTAA ACAAGACGTT GGAGAAATTC ACTGGTAAGC CTCATGTTAT TGAAGAAGAA GAAAAGGATG TGATTAGAGA AGAGATTCAA GTGACTCCAA AAAAACCAAA AAACAAATCA AGACGTGCTT CAGATGTTTT TCCTAGCTTC ATGAGACCAA CAGCTAGCAG CAGAAGATTA TCAGGAGCAG ATTTTAGCGT AACCCCTAAT GCTTCGGGCT ATAAGTCTAG AAGGAACTCG ATGATATCTG TCCGAGCTGA ATCTGTGCGC CTTCCGGTGA AGAAGAACAG ATATGATTCT GCCTGTGACT CATCAGACAG GAGCGTTTCA AAATCGACTT GCGTTATGCG TCAAAATACA TCAGATGATG CAACGGTGTA TAGTCAGGAC ATATCTGAAT GTGACATTAA GTTGGTAGTG TCTGAGCACA AGCCAAAAGC ACTGCAGATG GGGCCTGGAT CTGCGACAAA ATCCCGCTCC AAGATCGGTA ACTTCGAGAA AGATGCGGCG CAGAAGATGG ACGGAACAGA GTTTTCTAGG ATTAACAGTT GGCTTCGTTC GCAATCTGAA AACAGAAATT ACGTGCTTGA CAAGGATCAA CTTCCTGCGA CTCCCCAAAA CAGGTCGTTG GAGAAGTCAT CAACACAGAG TTTTACAACG GAGAAGATCA CTGGAAATGA GTTCTTGGAA AAATTGGAAG ATATAGAAGA GTCTAAAACA GATGAAACAG TGGTTAAACC TACACAAATG CTTAAAAAGC TGTTTGAGCT GCAATGTCTC TGTTCTGCTG AAGAAGAGGA TCAGATTTTG TCCAGATTCC CAAATCCTGG TTATGAGGAT GTTGATGAGT CTCTTTATCC TCCCGTTTTA GAAAACGATG GATTTAGCCA ACACATAGAC AATGAATGGT TTGGAGTCAA TCACAGTGCG GCTTGGGAGC GAGATTCACC AGCCACGATC CCGTTGTTAG AACGTGAACC GGATCTCAAA CAGCTGTTAC CGGAATTGGC TTTCGATCAT TCACTTAAAC CAAGAGGTTT GGCGTTCGCG GAGGATGTAG CTCCACCATT GCTTAGAGCA CAAGAAACCT TGGGAGAAAG AGGAAAAGCT CCAACGTTCA TGCAGAAAGT TCAGGCTTTA TGCTTCCGCA TTCTTCTGGG ATTAGGGTTT ATTGATGTGG GCTATGGTAA TGACTTTTTC AGTGGATTAA CCAAGTAAAG ACAAGAACTG ATTCAATTCG TCTTTGAGAT CCCCAAAAGA TGCATTTTTG AATAAAAGTT AGTTTTGTAC TTTAATGATT CCGTTAGAAT CCATTTATAG TTTTGTTTAA A
Length2681
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27913444.. 27917513
Download Sequence
A.thaliana
AGI-codeAT1G55550.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.088 Ahg936534 photosystem II light harvesting complex gene 2.3
17.4356 Ahg490527 glycerol-3-phosphate acyltransferase 8
25.3772 Ahg915377 RNA-binding (RRM/RBD/RNP motifs) family protein
31.3369 Ahg914843 Protein kinase superfamily protein
36.1663 Ahg945123 Putative membrane lipoprotein
36.1801 Ahg484556 photosystem II light harvesting complex gene 2.3
36.3318 Ahg492918
38.0657 Ahg897167
41.2795 Ahg313253 cellulose synthase-like A10
42.2137 Ahg951932 gamma-glutamyl hydrolase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression