Detail



ID : Ahg936534

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936534|scaffold_500725.1
Sequence
GGAGTTTAAA AAAAAAAAGA ATGGCAACTT CAGCAATCCA ACACTCCTCT TTCGCCGGCC AAACGACCCT GAAGCCATCC AACGATCTCA TTCGTAAGGT CGGAGCCTCC AATGGTGGCG GCCGCGTCGT CATGCGACGT ACCGTCAAGT CTACTCCTCA GAGCATCTGG TACGGACCAG ACCGTCCCAA ATACCTAGGA CCATTCTCGG AAAACACACC ATCATACCTA ACCGGAGAAT ACCCTGGAGA CTACGGCTGG GACACCGCCG GTCTCTCAGC TGATCCAGAA ACATTCGCAA AGAACCGTGA GCTCGAAGTA ATCCACAGTA GATGGGCAAT GTTGGGCGCT TTAGGCTGCA CCTTCCCAGA AATTCTCTCC AAAAACGGAG TCAAATTCGG TGAAGCCGTG TGGTTCAAGG CAGGATCACA GATCTTCTCA GAAGGAGGAC TTGATTACCT CGGAAACCCT AACTTGATCC ACGCGCAAAG CATATTAGCC ATTTGGGCTT GTCAAGTTGT GCTAATGGGA TTCATTGAAG GGTACAGAAT CGGAGGTGGG CCTCTTGGTG AAGGACTTGA CCCACTTTAC CCTGGCGGAG CGTTTGACCC GTTGAACTTA GCGGAGGATC CAGAAGCATT CTCGGAATTG AAGGTGAAGG AGCTCAAAAA CGGTCGTCTT GCGATGTTCT CAATGTTTGG ATTCTTTGTT CAAGCCATTG TTACCGGTAA AGGTCCGATA GAGAATCTGT TCGATCACAT TGCAGACCCT GTGGCTAACA ACGCTTGGGC TTACGCCACC AACTTTGTCC CCGGAAAATA GAGTTTGATC GGATAATTTA TGTAAA 
Length846
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3745048.. 3750101
Download Sequence
A.thaliana
AGI-codeAT3G27690.1
Descriptionphotosystem II light harvesting complex gene 2.3
TAIR curator summaryEncodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.
Alias[LHCB2][LHCB2.3][LHCB2.4][LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2][photosystem II light harvesting complex gene 2.3]
Gene coexpression
MR
MR Locus Description
1 Ahg484556 photosystem II light harvesting complex gene 2.3
5.2915 Ahg943255 methionine sulfoxide reductase B6
9.69536 Ahg478197 light harvesting complex photosystem II
13.4164 Ahg495512 light-harvesting chlorophyll B-binding protein 3
14.7309 Ahg947862 Protein of unknown function (DUF1997)
16.2481 Ahg484604 TRAF-like family protein
16.9706 Ahg485112 light-harvesting chlorophyll-protein complex I subunit A4
17.088 Ahg474616 P-loop containing nucleoside triphosphate hydrolases superfamily protein
18.303 Ahg472386
18.3303 Ahg482403 light-harvesting chlorophyll-protein complex II subunit B1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression