Detail



ID : Ahg474617

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474617|fgenesh2_kg.1__4571__AT1G55560.1
Sequence
CAAAGGATTC ATTAAGAGCA AAAACTAGTT TTGCTTTAAT CTTTTTTGTA GGAAAGGGTT AATTATACGT AACACAGAAA CCAAAATAAT TCTCTTTTTC CTCTAGAAAA AGAGAAAATA AAAATGGAGG GGAGGTTATT GACGGTGTTG GTCTGCCTCG TCTCTACGGT GGCTATCGTG AACGCCGGTG ATCCTTACTT CTTCTATACA TGGAACGTGA CTTACGGAAC CGCCTCACCT CTCGGTGTTC CTCAAAAGGT GATTCTCATC AACGGTCAAT TCCCTGGTCC TAACCTTAAC TCAACCTCTA ACAACAACGT CGTCATCAAT GTCTTCAACC ACCTAGACGA ACCTTTCCTC TTGACCTGGA GCGGGATTCA GCACAGGAAG AACTGCTGGC AAGATGGTGT GGCTGGGACT TCATGCCCCA TCCCAGCAGG ACAGAACTTT ACTTATCATT TCCAACCTAA GGACCAGATT GGTTCTTACT TCTATTACCC GACCACTTCT CTCCACCGCT TTGCTGGTGG TTTTGGTGGT CTCCGTGTCA ACAGCCGACT CCTTATTCCT GTTCCTTATG CTGATCCTGA GGATGACTAC ACTGTTCTTC TCGGTGACTG GTACACAGCT GGCCACACTG CTCTCAAGAA CTTCCTTGAC AGTGGACGCA CCCTTGGATT GCCTAACGGT GTTTTGATCA ATGGAAAGTC TGGAAAGGTG GGAGGAAAGA ACGAGCCTTT GTTCACAATG AAGCCTGGAA AGACTTACAA GTACAGGCTC TGCAATGTTG GGTTCAAGTC TACACTTAAC TTCAGGATCC AGAACCACAA GATGAAGCTT GTGGAGATGG AAGGATCCCA TGTTCTTCAG AACGACTACG ACTCTCTCGA TGTCCATGTC GGCCAGTGCT TTTCAGTTCT TGTGACTGCT GACCAGGCAG CTAAGGATTA CTACATGGTT GCATCGACTA GGTTCCTCAA GAAGGAGTTG AGCACCGTGG GTGTGATCCG GTATGAGGGA AGCAACGTTC AGGCTTCAGC TGAGCTCCCC AAGGCTCCCA TTGGATGGGC TTGGTCTTTG AACCAGTTTA GGTCTTTCAG GTGGAACCTT ACCGCTAGTG CTGCCAGGCC TAACCCACAG GGCTCATACC ATTACGGAAA AATCAACATC ACCCGTAGCA TCAAGCTTGT CAACTCTAAG AGCGTGGTTG ACGGCAAAGT CCGGTTTGGT TTCAACGGTG TATCACATGT TGACACCGAG ACTCCTTTGA AGCTAGCTGA GTACTTCCAG ATGTCAGAGA AGGTGTTCAA GTACAATGTG ATCAAGGACG AGCCTGCAGC CAAAATCACA GCATTGACTG TACAGCCTAA TGTTCTCAAC ATCACTTTCC GTACCTTTGT AGAGATCATT TTCGAGAACC ACGAGAAGAG CATGCAGTCA TTCCATTTGG ATGGTTACTC CTTCTTCGCT GTCGCGTCTG AGCCAGGAAG GTGGACACCT GAAAAGAGAA AGAACTACAA CTTGCTCGAT GCGGTTAGCA GACACACCGT GCAAGTATAC CCCAAGTCTT GGTCAGCTAT CCTCTTGACA TTCGACAACG CCGGTATGTG GAACATCAGG TCTGAGAACT TGGAGAGGAG ATACCTAGGC GAGCAATTGT ATGTCAGTGT TCTATCACCC GAGAAATCGC TAAGGGACGA GTACAACATC CCCCTCAACA CTAACCTCTG TGGCATCGTC AAGGGCTTGC CATTACCTGC ACACTACTCC TAAATCAATA TTCAATTAAC TACTCTACAA AGTGGGGTGC ATTATTAAAA TTAACTTATT AACCCTTTCC TAACTAAGTG TAATTTGTAA ACTACAGTTC CACTTCTTTC ATATACTATC ATTAAACCAT AATCATATAC CAAGTTTTGC TTTCATTAC 
Length1929
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27918604.. 27920946
Download Sequence
A.thaliana
AGI-codeAT1G55560.1
DescriptionSKU5 similar 14
TAIR curator summary
Alias[sks14][SKU5 similar 14]
Gene coexpression
MR
MR Locus Description
18.2209 Ahg490578 cellulose synthase like D4
22.1811 Ahg485821 alpha/beta-Hydrolases superfamily protein
26.6458 Ahg358371 Pectin lyase-like superfamily protein
38.0526 Ahg473654 auxin response factor 14
43.2666 Ahg485277 O-acyltransferase (WSD1-like) family protein
49.1121 Ahg925744
58.8643 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
61.384 Ahg486927 cation exchanger 4
61.5224 Ahg921700 ENTH/VHS/GAT family protein
61.8708 Ahg913044
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression