Detail



ID : Ahg486927

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486927|fgenesh2_kg.6__61__AT5G01490.1
Sequence
AAAGTTTTGT GGGTTTTGAC CAGAGAGAGT CAACGAAGAA GATGTCTTCT ATCATTACGG AATCGTCTCC GAATCTGTCT CTGCTGGAGA ATGGCGGAGG AGGAAGTGAT AAGCCGACGG CGGAGATGTC TAGGCGCGTG CGGAGAACGG TATCGACGTC GTCGTTGATA AGGCAGAGAT CGGATCTGAA GCTGATTGCG AGAGTACGTT GGGAGTTTCT GAGACGAATC TTGACGAATC TTCAAGAAGT TGTTCTCGGC ACCAAATTGT TCATTCTCTT CCCGGCCGTT CCTCTCGCCG TTGTCGCTCA CCGCTATGAT TGTCCACGTG CGTGGGTCTT TGCGTTGAGC TTGCTGGGAT TGACACCTTT GGCCGAACGT ATCAGTTTTC TCACTGAGCA AATTGCTTTC CATACCGGTC CAACAGTTGG GGGATTAATG AACGCGACAT GTGGAAACGC GACGGAGATG ATAATAGCGA TTCTAGCGGT TGGACAAAGA AAGATGAGAA TAGTGAAACT CTCACTTCTT GGTTCTATTC TCTCCAATCT TCTCTTCGTC TTAGGTACCT CTCTCTTCCT TGGTGGCATC TCCAATCTCC GCAAACACCA ATCTTTCGAC TCAAGACAGG GAGATATGAA CTGCATGTTG TTGTATCTGG CGCTGTTGTG TCAAACACTA CCAATGATAA TGAGATTCAC AATGGAGGCT GAAGAATACG ATGGATCAGC TGTTGTTATG TTGTCAAGAG CAAGCAGCTT CGTGATGCTC ATTGCTTACT TGGCTTTCCT CATCTTTCAC CTCTTCTCTT CTCATCTCTC TCCTCCTCCT CCTCTTACTC AGGAAGAAGA GGACGTGTAT GACGATGACG TGAGTGACAA GGAAGAAGAA GGAGCCGTAA TTGGAATGTG GAGTGCCATT TTTTGGCTTA TTATAATGAC ACTTCTCGTT GCTTTGCTCT CAGAGTACAT TGTCTCCACT ATCCAGGACG CAGCAGACTC GTGGGGATTA TCAGTGGGAT TCATAGGAAT AATATTATTA CCAATTGTTG GTAATGCAGC TGAGCACGCT GGTGCTGTCA TCTTCGCCTT CCGTAACAAA CTCGATATAA CTCTTGGAAT TGCTCTTGGA TCTGCAACAC AAATTGCTTT GTTCGTGGTA CCAGTGACAG TGTTAGTGGC ATGGATAATG GGAATAGACA TGGACCTTAA CTTCAACCTT CTTGAGACCA CTTGTCTTGC CTTGTCCATT ATCGTTACTT CCTTAATACT ACATGATGGG ACGTCGAACT ATATGAAAGG CTTGGTTCTT CTCTTGTGTT ACGTTGTCAT TGCGGCATGC TTCTTTGTCT CTAATTCACC CTCAACCGAT ACAGCTAAAG CTAATCATAC AATAACGAAA AGGTAACTCG AATATTGTTT AATTTGCCTT TCTTTTAGTG TATTGTTGTT TTCTCTTATT ACATATTT 
Length1468
Protein Sequence
Protein Residue
Map Locationscaffold_6: 211432.. 220928
Download Sequence
A.thaliana
AGI-codeAT5G01490.1
Descriptioncation exchanger 4
TAIR curator summaryEncodes a cation/proton antiporter, a member of low affinity calcium antiporter CAX2 family. Involved in root development under metal stress.
Alias[ATCAX4][CAX4][cation exchanger 4]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg315689
4 Ahg351608 Protein of Unknown Function (DUF239)
5.47723 Ahg321478 Fatty acid hydroxylase superfamily
5.56776 Ahg351609 Protein of Unknown Function (DUF239)
5.83095 Ahg933779 Domain of unknown function (DUF313)
5.91608 Ahg942510 transposable element gene
6 Ahg927887 MATE efflux family protein
6.63325 Ahg485653 purple acid phosphatase 21
6.9282 Ahg327310 Galactose oxidase/kelch repeat superfamily protein
7.48331 Ahg947152
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression