| Annotation |
|---|
| Description | jgi|Araly1|474746|fgenesh2_kg.1__4700__AT1G54710.1 |
| Sequence |
AAAAAGCAAA CCCAAAAAAA AAAAAAAAAC AGAAACACAA AAAAAAAAGC AAAGAACCGT TTCTTCTTCA TCTTCATCTT CTTCTTCGCT TCGTCTTCTT CTTCTTCTTC CGTGAAGAAG GTCAAAAACA CACCACCGCT TAACCCAATT ACAAAAAAAA AATGGCAAAG CTTCACAATT CCTCAAATTA AACAATCTCT TTTAGTTATT TCCCCTTCTT CTTCGTAATC GCCGCCGGCT TATGCTGTTT CCGATTGTTA TCTCCGGTGT ATCTCCGGTG GTCTCTCCCA CGACTAATTT ATAATTACTA TGAAGAGCAA CTCCAAAATC AACAACGGAG ATAATCATAA TCAAACGAAG AATAATGGTA CTAATGGCTT TTTGCCTAAT TCGTTAAAAT TCATCTCTAC TTGTATCAGA ACTGCTTCTT CCGGTGTTCG CTCAGCTAGC GCCTCCGTCG CTGCTTCTCT CTCTTCTGAT TCTCATGAGC TTAAAGATCA GGTGTTGTGG TCTTCATTTG ATAGATTACA CACAAGTGAA TCTTCTTTCA AGAACGTTCT TTTACTAGGT TATACGAACG GGTTTCAAGT TCTTGATATC GATGATGCAA GTGATGTTAC CGAATTTGTG TCGAGGCGGG ATGATCCGGT TACGTTTTTA CAGATGCAGC CATTACCTGC CAAATGTGAT GGTGTTGAAG GTTTTAGATC ATCACATCCT ATACTTTTAG CTGTTGCTGA TGAGGCTAAA GGTTCAGGTC CTATTGTTAC TGGTAGAGAT GGATCGGTTA GAAATGGTTA TGAGGATCCT CTTGCACTCT CTCCCACGGT TGTGCGGTTC TATTCGCTTC GATCTCATAA CTATGTTCAT GTTTTGAGAT TTCGATCTAC TGTTTATATG GTTAGATGCA GTCCTCGGAT TGTCGCTGTT GGCCTTGGTT CGCAGATATA TTGTTTTGAT GCTCTAACTC TTGAAAACAA ATTCAGCGTC CTTTCGTATC CTGTACCTCA GCTTGGAAAC CAAGGGATAT CTGGGGTTAA TGTCGGATAT GGTCCAATGG CTGTCGGACC TAGATGGTTA GCTTATGCTT CCAATAGTCC TTTGTCATCT AGTATAGGTC GTCTGAGCCC TCAGAATGTT ACTCCTCCTG GGGTCAGTCC ATCTACCTCG CCAAGTAATG GTAATCTAGT GGCAAGATAC GCCATGGAAT CTAGTAAGCA TTTGGCAGCT GGGTTACTCA ATATGGGTGA CAAGAGTTTC AAAACTATAA CTAAATACTG TCAAGATCTC AAGCATGATG GTCCTGGTCC TTCTCTTTCG TCCAGTCCTG GCCGGAAAGT TGGTCGGCTT GCATCTCATT CAGCAGAGTC AGATGTTGTT GGAACGGTAA TTGTCAAAGA TTTTGAGTCC CGAGCTATTA TAGCACAATT CAGGGCTCAC ACTAGTCCAA TTTCTGCTCT CTGTTTCGAC CCAAGTGGCA CTCTACTAGT AACAGCCTCA ATCCACGGTA ACAATATTAA CGTTTTCCGG ATTATGCCGT CACCTACAAA GAATGGAACA GGTGCTCAAA GCTATGATTG GAGCTCCTCC CATGTGCCTC TTTACAAACT ACATCGTGGC ATGACATCAG CTGTAATACA AGATATTTGT TTTAGTAGCT ACAGTCAGTG GATTGCAATT GTATCATCTA AGGGCACCTG CCATATCTAT GTTTTGTCTC CGTTCGGCGG AGAAAATGTT CTTGAAATAC GAAACTCTCA ATTTGATGGA CCAACACTTG CTCCAACATT GTCCCTGCCG TGGTGGTCGA GTCCATCGTT TATGACCACC CATTTTTCAT ATCCACCCCC AGCGTCGGTT ACTCTTTCTG TGGTTAGCCG AATCAAATGC AACAATTTCT TCCATGCTGC AAGTTCCGTT GTAGGAAAAC CGACCTTCCC CTCTGGCTGT CTTGCTGCTG TTTTCCATCA ATCTGTGCCA CATGAATCGC AGTCGTCATC TCATGCCTTG GACTACTTAC TGGTTTACAC CCCATCAGGT CATGTAGTTC AATACAAACT CATTCCATCT CTTGGAGGAG ACCAGGCTGA GAGCAATACG CGAAATGGAG CAACTTCTGT ACTGACTTCT GAAGAGGAAC TGAGAGTGAA AGTTGAACCA GTTCAGTGTT GGGATGTCTG TCGAAGAGCT GATTGGCCAG AGAGAGAGGA GAACATATGT GGGCTTACTT ATGGTGGACG AAACATTGCA GAGCAAACCG TTGATACCTC TGATAGTGAA GACTTAACAA AGCCTCTGGA GAAACACCAT GTTTATCTTG CCAATGCAGA GGTGCTGATA AACTCCGGAA GAAAACCAAT CTGGCAAAAT TCAGAGATAT CCTTCTATCC GATGTTTCCA CCAGACTCTG ATGGCAAGAA CCTGAATTCG CATCAAGGTG GTGGGGAGAC AGAAATCGGG AAAGTATCAG CGAATGAGGT TGACATTAGG CGGAAGGATT TGCTGCCGGT GTATGATAAT TTTCACAGTG TGTATACCAG TATGCGCAAC AGAGGATTTT CTGCGGAAAG AGATTCAGAT TCAACTTCTT CTTCAGATCC CGGACAAGTT AAAGAAATTC ATCCATTCAA TGGTATGGCT TACCCCGAGG ATGTGGAAAG TAGAGGAAGT GCCCATTTTG CACTAACTCC AAAACAAAAT CCTCATACCG GGATTGTAAC ATTTAAACAG CCTGTAGTTT CCATTTCTTC TGCTGTGAAA GACACTGATT ATATAGACGA CGCTCATCTC TTGCCAAAGA ACACCTCCCT GCCCGCTGAA ACAAGAATTG AAAACAGCAG CGGGATAAGT GGAGATTCAA ATGTAAGTTC TAACCGTTCT GATATGAGCA TGAATGCAGC TGGCGAGGGT GAAGGACCCA TTGATGGCTC CCCAAATTTC GAGCAGTTTT TCAAGGAGGT GATCTCCAAT GAAACTGTTA CAGAAACTGA GCATAAGGAT GCTCCATCTG ATGGAAAACT CGATGATGAT GACGAGGATG ACATGCTTGG TGGTGTTTTC GCTTTCTCCG AAGAAGGTAA AAAGAATCCA TCCCATATCC CGTAAGTTGA GTTTAGTTAA ATCTATGGCC AAAGCTCTAA TGGAGAAGGG GTCACTTACT AATCCCGTTT GCTGCAACTT ACTCACTGAT GATCTTAATT CCCTGAAAAA AAAACTTTTA AAATCAATTT CTTTTATCAT CTGTTTCTGT AAATGCTTGT AAATGAATTG TTCATTATCA ACAGTCTCTC GATTTCCATG GACTGTTTCT TTGTAATTTT TTT |
| Length | 3323 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 29364114.. 29368376 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G54710.1 |
| Description | homolog of yeast autophagy 18 (ATG18) H |
| TAIR curator summary | |
| Alias | [ATATG18H][ATG18H][homolog of yeast autophagy 18 (ATG18) H] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.24621 |
Ahg490301 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 13.8564 |
Ahg489360 | Major facilitator superfamily protein |
| 17.7764 |
Ahg488386 | U-box domain-containing protein |
| 19.2873 |
Ahg892706 | actin binding |
| 23.6643 |
Ahg477743 | RNA polymerase II transcription mediators |
| 24.8193 |
Ahg485477 | Senescence/dehydration-associated protein-related |
| 26.533 |
Ahg939686 | Phosphatidic acid phosphatase (PAP2) family protein |
| 27.2213 |
Ahg478163 | RNA-binding KH domain-containing protein |
| 29.1719 |
Ahg475928 | |
| 29.3428 |
Ahg473032 | Protein of unknown function (DUF616) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|