Detail



ID : Ahg490301

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490301|fgenesh2_kg.6__3435__AT4G02590.2
Sequence
TCTGTCTTCT TCGTCCTCAT TCGTTTTAAA GCATCAAAAA AAAAGTCTGT AGCTTTCGCA TGTAAATCTC TCCTTGAAGG CTTCTAACTC GTTAATCGTA ACTCACAGTG ACTCGTTCGA GTCAAAGTCT CTGTTTTTAT CTCAAAACCA TGGCTAGTAA CAACCCTCAC GACAACCTTT CTGACCAAAC TCCTTCTGAT GATTTCTTCG AGCAAATCCT CGGTCTTCCT AACTTCTCAG CCTCTTCTGC CGCCGGTTTA TCTGGCGTTG ATGGTGGATT AGGTGGCGGA GCACCGCCGA TGATGCTGCA GTTGGGTTCC GGAGATGAAG GAAGTCATAT GGGTGGCTTA GGAGGAAGTG GACCAACTGG GTTTCACAAT CAGATGTTTC CTTTAGGGTT AAGTCTTGAT CAAGGGAAAG GACCTGGCTT TCTTAGACCT GAAGGAGGAC ATGGAAGTGG CAAAAGATTC TCAGATGATG TTGTTGATAA TCGATGTTCT TCTATGAAAC CTGTTTTCCA CGGGCAGCCT ATGCAACAGC CAGCACCATC GGCACCACAT CAGCCTACAT CAATCCGCCC TAGGGTTCGA GCTAGGCGTG GTCAGGCTAC TGATCCACAC AGCATCGCTG AGCGGCTACG TAGGGAAAGA ATAGCAGAAC GGATCAGGGC GCTGCAGGAA CTCGTACCTA CTGTGAACAA GACCGATAGA GCTGCTATGA TCGATGAGAT TGTCGATTAT GTAAAGTTTC TCAGGCTCCA AGTTAAGGTT TTGAGCATGA GCCGACTTGG TGGAGCCGGC GCGGTTGCTC CACTTGTTAC TGATATGCCT CTTTCATCAT CAGTTGAGGA TGAAACGGGT GATGGTGGAA GGACTCCGCA ACCCGCATGG GAGAAATGGT CTAACGATGG GACTGAACGT CAAGTGGCTA AACTGATGGA AGAAAATGTT GGAGCCGCGA TGCAGCTTCT TCAATCAAAG GCTCTTTGTA TGATGCCAAT CTCATTGGCA ATGGCAATTT ACCATTCTCA GCCTCCGGAT ACATCTTCAG TGGTCAAGCC AGAGACGAAT CCTCCACAGT AGGATTTGTG CAATAAAAGA GTTTGTACAG CAATCCAACG GTCCAACATG GGTTTTGCTT CTGCTCTATT GACTCTGGTT TCTTCTCTAC TCTCACACCC ACTTGAAAGG TGGACTTTGA TGAAAGCAAC TTTTTGTTTT CAAGACTTTA GTGGGAGGTT GAGGAAGGAG CTTGCAGTGG TATTATTATT AGTAGTAGTA GTGGGGAGGT GTGGGACCTC GTTGAGTTAT GTTCAAATTG AAGAAAAATA AGTATTTGTA ATTTGTCATC CCTTGTATTA TTATTTATTT TGTATGACTT TGGAGCAATA AAATAA 
Length1396
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22153521.. 22156592
Download Sequence
A.thaliana
AGI-codeAT4G02590.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[UNE12][unfertilized embryo sac 12]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg495780 CwfJ-like family protein / zinc finger (CCCH-type) family protein
5.2915 Ahg358984 NSP (nuclear shuttle protein)-interacting GTPase
6.7082 Ahg477791 Transducin/WD40 repeat-like superfamily protein
7.34847 Ahg487116 Transcription factor DP
8.24621 Ahg474746 homolog of yeast autophagy 18 (ATG18) H
8.7178 Ahg328660 cyclic nucleotide gated channel 9
10.247 Ahg478525
11.8322 Ahg490579 SEC7-like guanine nucleotide exchange family protein
12.8062 Ahg485400 Phosphoglycerate mutase family protein
17.4356 Ahg477442 receptor-like protein kinase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression