Detail



ID : Ahg474909

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474909|fgenesh2_kg.2__39__AT1G64400.1
Sequence
TCTAATTGCT TCTTTTACAT TTCAACGAAC AAAACAGATA TATACATAGA AAGAAACACA GATACGCAGA TATAGTAAAT GGCGACTAGT CGATACATCT TTGAGGTTGA GAAGGGAAAA CAAGGCGTCC ATGGAGGAAG TCCATCGGTC GGTCCGGTTT ACCGGAGTAT CTACGCTAAA GGCGGTTTTC CAGAACCGGC CGATGATCTC GTCAGTGCAT GGGATATTTT CCGATTATCT GTGAAGAAAT CTCCAGATAA TCCTATGCTT GGTCGTAGAG AAATAGTTGA TGGAAAAGCT GGGAAATATA TATGGCAAAC TTACAAAGAA GTATATGATG TAGTGATTAA GCTTGGAAAC TCTATCAGAA CTATTGGAGT TGGAAAAGGA GCGAAATGCG GTATTTATGG CGCCAATAGT CCTGAATGGA TTATAAGCAT GGAGGCTTGC AATGCTCATG GACTCTACTG TGTACCTTTA TATGACACTC TAGGTGCTGG AGCAATAGAA TTCATCATTT GTCATGCAGA AGTCTCACTC GCTTTCTCTG AGGAGAAAAA AATCTCTGAG TTATTGTTGA CAGCTCCAAA ATCAACTAGA TATTTGAAGA ATATTGTGAG CTTTGGTGAG GTTACAAATG GTCAAAGAGC AGAAGCTGAG AGGCATGGAT TAACAATATA TTCATGGGAC CAATTCTTGA AGCTAGGTGA GGGTAAACAT TATGAATTAC CAGAGAAGAG AAGCAGCGAT ATTTGCACCA TCATGTATAC AAGTGGCACA ACTGGTGATC CTAAAGGAGT CTTGCTTACA AATGAGAGCA TTATCCATCT ACTTGAAGGT GTTAAAAAAT TGCTTAAATC TATAAATGAA GAGTTAACCA GTAAAGATGT TTATCTCTCA TATCTACCTC TGGCTCATAT CTTCGATCGC GTGATTGAGG AGCTGTGTAT ATCTGAAGCA GCCTCTATCG GATTCTGGCG AGGGGATGTT AAGATATTGA TAGAAGACAT TGCTGCATTG AAACCGACTG TTTTCTGCGC TGTTCCTCGC GTGCTAGAGA GAATTTACAC CGGTCTTCAG CAGAAACTTT CTGATGGTGG TTTCATAAAG AAGAAATTAT TCAACTTTGC ATTCAACTAC AAACATAAAA ACATGACGAA AGGGCAGCCT CATGAACAAG CATCTCCAAT GGCTGACAGA GTTGTATTTA AAAAGGTAAA AGAAGGGTTG GGAGGAAACG TGCGTCTGAT CCTCTCAGGA GCAGCTCCTC TTGCAGCTCA CATCGAATCT TTCCTTCGAG TTGTCGCGTG TGCTCATGTT TTGCAAGGAT ACGGTCTAAC AGAGAGTTGT GGTGGCACTT TTGTGTCCAT TCCAAATGAG CTTGCAATGC TTGGAACGGT TGGTCCACCG GTTCCTAACG TTGACATAAG GCTCGAGTCA GTTCCAGAGA TGGGTTATGA CGCTCTTGCA AGCAACCCAC GTGGAGAGAT TTGCATCAGA GGAAAGACTT TGTTCTCTGG ATATTACAAA CGTGAAGATC TCACTCAAGA AGTCCTCATT GATGGTTGGC TTCATACTGG TGATGTTGGT GAGTGGCAAC CAGATGGAGC CATGAAGATA ATCGATCGCA AGAAGAACAT CTTTAAACTG TCTCAAGGAG AATACGTTGC GGTTGAGAAC TTGGAGAACA TATACAGTCA TGTCGCGGCC ATTGAATCGC TATGGGTATA TGGAAACAGC TATGAGTCTT ACTTAGTGGC TGTGGTATGT CCAAGCAAGA TTCAGATTGA ACATTGGGCC AAAGAACACA GTGTTTCAGG AGACTTTGAG TCTATCTGTC GAAACCAAAA GACTAAAGAG TTTATCCTTG GAGAATTCAA CAGAGTAGCC AAAGACAAAA AGCTGAAGGG ATTTGAGCTG ATCAAAGATG TTCATTTGGA CACGGTACCG TTCGACATGG AAAGAGATCT CATCACACCT TCTTACAAGA AGAAAAGGCC TCAGCTTCTC AAGTACTATC AGAAAGAGAT TGATAAAATG TATAACAAAG ACAAACAATT GAAGCTTTGA GTGTAAAGAA AGGAAGTTGT TGGACAAGTC TCTCAGGTTT ATATGTTTCT CTTATCACTC TAATTCATAT TGTTATATGT CTCTCTATGT TGTGTTAATA TCGAAGAGTT TTTTTTTTGC TTGTAAACAA CCAAATCTTT TTATTGTACT CAACATTATC CTGTTTTGTG TATTTGTATT GATATTTTAA TAAAGTTCTC TG 
Length2272
Protein Sequence
Protein Residue
Map Locationscaffold_2: 227550.. 232247
Download Sequence
A.thaliana
AGI-codeAT1G64400.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summary
Alias[LACS3][long-chain acyl-CoA synthetase 3]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg950909 Major facilitator superfamily protein
3.87298 Ahg481889 FAD/NAD(P)-binding oxidoreductase family protein
4.89898 Ahg490837 Homeobox-leucine zipper protein family
6.16441 Ahg477399 SPFH/Band 7/PHB domain-containing membrane-associated protein family
8.48528 Ahg472924
10.0995 Ahg473866 Granulin repeat cysteine protease family protein
11.6189 Ahg486718 P-glycoprotein 21
13.8564 Ahg481314 FAD-dependent oxidoreductase family protein
14.4222 Ahg947663 lysine histidine transporter 1
15.2315 Ahg921319 T-complex protein 11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression