| Annotation |
|---|
| Description | jgi|Araly1|474940|fgenesh2_kg.2__70__AT1G64142.1 |
| Sequence |
ATCATTTCCA CTCCCTTCAA AAAAGCGTCT CTCTCTCTCA TCTCCTATTT ATTTATACCT CTCTCATTCT CTCTCGCCGG CGCTGCAAAT CCCTAGATTT TCCAATCACA CCCAAAAAAG TACTCAATTT CGCTGATTGA GAATCGCGAT TTGATTTTAT CATTCGATGC CGTGAAAATC TCGTAATCAG ATTCAAAATT GAGGATGGTT AACTGCTACC GTAATCCTTG CGTGAAGTTC GAGAAGAATT AACTTTGGTC TGTGAGCAAC TTTCGAATCA GCTGTGCTAG ATTTGCTTTC AACTTTATTT GAAGATGGAT CGTTGCGATA CCTCAGGATT TGTAAGCGGC GGTGGAGATG CTTATAAGGT CTTTTAACTC TTATTAGAGC TGTGGCTTAT TCTCTTAACC CGGAAGTTGT TGTGGTCTTG GCTTCGCGTC TTTGCTTTTG GTGTTCTTGA CAAAAAAAAG TTTTCATTTT TAGTTGTGAC TATGCATTCC AGATTCCAGA ACAGTGCTTT TGCTGGTAAT TCCTCATCGA ATTCTTTTAA GATTTTGGGC CGTTCCCTTC AAGTTGAAGT CCCTGAGGCC GCGGATACTA CTCTGCGTCT TGATTCCCTT GCCTCTCCGT TGTCTAATGC CAAGGGAATC AAAAGGAAAT GGAATCTGAT TGATGGATCT GATCCTTTAC TTTCCTTAAG ACTCGGTCAC TCTTCAAGCT CTTCTGATAG CAAAGGGAGT TCGGCTACTG CTTGCACGAG CTTATCTTCT GCCAAAGAAA CTGAGGAGGC GTCCTCGATG GATATTGAGT TGGACTTTAG CCTCCATCTT GGCAACGAGA AATCGGCGGC TAGCAACAAA AAGCCAGCTA ATTTGAAAAT GAAAGGGTTG CAGGTCCCCT CCCAGAAATT TGATCTTGAA CTGAGTCTTT CTGGTGGAGG GTCCTGTCAA TCTGAGATCA CTGCGGTCCA GCAGCACGCC AACCGATTTC AATCTCTTGC TGACATGCTG CGTGCAACTA ATGAAGAATC CACATCATGT GGTTGGAGGC CAGGGTTTGG ATTACCGACA TTGCAAACCT CTTCAAGCAA AGAAACAAGC TCCTTCTTAG GCCATGTTCC CAAAAATGTC ATCATTCCTG CTGCTCATGT TCTGGAACTG TCATCTAGCA CGGCGACAAC AACACCAATA AGCTCGGGTA CATGCACTTC CGGTTTATCT CAGCAGCTGA AGCCACAGCT TAAGAATTCT TCTAGTTCCA AGTTATGTCA AGTAGAAGGA TGTCAGAAGG GAGCAAGAGG CGCATCTGGC CGTTGCATTT CCCATGGTGG TGGACGTAGA TGCCAGAAAC ATGGTTGCCA CAAGGGCGCT GAAGGTCGAA CTGTGTACTG TAAAGCCCAT GGAGGTGGTC GTCGATGTGA ATTTCTCGGA TGCACCAAAA GCGCAGAAGG CCGTACTGAC TTTTGTATAG CCCATGGAGG TGGTCGAAGA TGCAGCCATG AAGATTGCAC ACGAGCTGCT AGGGGAAGAT CAGGACTCTG TATCAGGCAC GGTGGAGGAA AGAGATGCCA AAGAGAAAAC TGCACTAAAA GCGCTGAAGG CCTTTCGGGA CTCTGCATCT CTCATGGTGG TGGTCGGCGA TGTCAATCTA ATGGATGCAC AAAAGGAGCG CAAGGGAGCA CAATGTTCTG CAAGGCACAC GGTGGTGGTA AACGGTGTAC ACACTCGGGT TGCACCAAAG GTGCAGAAGG AAGCACGCCG TTCTGTAAAG GACATGGAGG AGGTAAAAGA TGTGCCTTTC AAGGAGATGA TCCTTGCTCC AAGAGTGTTC ACGGAGGTAC CAATTTCTGT GTGGCACATG GCGGTGGTAA GAGATGTGCA GTTCCTGAAT GCACAAAGAG TGCTAGAGGA AGGACTGATT TCTGTGTCAG ACATGGTGGA GGAAAGAGAT GCAAGTCTGA AGGATGTGGC AAAAGTGCTC AAGGTAGTAC TGACTTTTGC AAAGCACATG GAGGAGGGAA ACGGTGTGCG TGGGGTCAAC CCGAGACTGA GTATGCGGGA CAGTCTTCCT CTGGTCCTTG TTCCTCGTTT GCTCGAGGTA AGACTGGTCT TTGTGCACTC CATAACAGTC TGGTTCATGA TAACCGTGTT CACGGAGGAA TGACAATAAC TTCTGAGAGC CAAGAACCGA GAGTAAGCAG CAGCGAAACA GAGAACGAGG AAGAGTTTAG CGGTTCTCAA GACATGAACA TGGATACAAT GAAAGCGAGA AGTGCTACCG GATCTCCAGA GACTGATGTT GATCTCAATG AGTATGAAGC AGGATTGGGG TTAGCTCCAG AAGGAAGAGT CCATGGTGGA AGTTTGATGA TGGCGATGTT GGGTAGAGAT GGTGGCTCTG GCTCTACCGA TGGGCCAAAG AGGTGGATGT AAGTTGTCTT CACTCTTCAG TTTGTTTCCA GTCTTCAATT CAACCCGTGT TGGTACTCGA GAGTGAAAGA GTCTGTGTTT GTTCTAGCTT TAGGTTTGCT TAGAGAGTCA AAAAAGGGTC CAAAGTCTGT GTCTTATTGG TCTTTGTAGA TATTGAATTA AGGGTCGAAG CAAAAGGTTA TTGTGATGTT GTGAATTATA CAGGTAAAAT CCCACCTGTG AACATTGTCA AAAACAGTCT TATGATGATG ATGATGATAA TAATAAAACT CATGTCTTCT ATTTGC |
| Length | 2716 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 416683.. 420030 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G64142.1 |
| Description | conserved peptide upstream open reading frame 23 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF23 represents a conserved upstream opening reading frame relative to major ORF AT1G64140.1 |
| Alias | [CPuORF23][conserved peptide upstream open reading frame 23] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg932377 | Protein of unknown function (DUF607) |
| 8.60233 |
Ahg473360 | proline-rich family protein |
| 9.53939 |
Ahg475761 | Cytochrome P450 superfamily protein |
| 12.7279 |
Ahg928734 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 14.1421 |
Ahg490963 | GRAS family transcription factor |
| 16.2481 |
Ahg334013 | mitogen-activated protein kinase kinase kinase 13 |
| 17.3205 |
Ahg472983 | interferon-related developmental regulator family protein / IFRD protein family |
| 18.7083 |
Ahg490638 | rotamase CYP 1 |
| 19.4422 |
Ahg948884 | |
| 23.0651 |
Ahg475836 | Rubber elongation factor protein (REF) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|