Detail



ID : Ahg334013

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|334013|fgenesh1_pg.C_scaffold_1000578
Sequence
ATGGAGAAAC AGAGTATCAG AAACATTTGT TCTTCTTCTT CTTCTTTAAT GTCATCTTCT TCTTGGGTTC GTGGTGCGTG TATCGGAAGA GGTTGTTTCG GTGCAGTTAG TACGGCGATC AGCAAAACCA ACGGTGAAGT TTTTGCCGTG AAATCCGTGG ATCTCACCAC TTGTCTCCCC ACCCAATCAG AGTCTCTCGA GAACGAAATC TCTGTCCTCT GTTCGCTCAA GCCTCACCCT CACATCGTGA AGTTTCTCGG CGACGGAGTC TCGAAAGAAG GAACGACGAC GTTTAGGAAT CTCTACTTGG AGTATCTACC AGAAGGTGAC GTGGCTAATT ACACTGTTGG AGGAATTAAC GACGAGACTC TGCTCCAGCG TTACACGGCG TGTCTTGTCT CTGCTCTCCG CCACGTCCAC TCTCATGGAT TCGTTCACTG CGACGTCAAG GCGAGAAACG TCCTCGTCAG CCAAAGCTCC ATGATCAAGC TAGCCGATTT CGGGTCGGCG TTCAGAATCC ATACACCAAC AGCACAGATC ACGCCACGTG GAAGCCCGCT TTGGATGGCT CCGGAGGTGA TCAGACGAGA GTACCAAGGT CCGGAGAGCG ACGTCTGGTC TCTCGGCTGC ACGATCATCG AGATGTTTAC TGGGAAACCC GCTTGGGAAG ACCACGGGAT TATAGACTCG CTGAGTCGAA TCGGTTTCTC CGACGAGTTA CCGGTTTTCC CCTCGAAGCT GTCGGAAATC GGCTGTGACT TCCTAGAAAA GTGTCTAAAG AGAGACCCGA ATCAGAGATG GAGTTGCGAT CAGCTTTTGC AGCATCCTTT TCTGTCTCAG TGTCACAACT CGTCTCCGAC TGAGTCATCT CCGCGTTGCG TACTTGACTG GGTCAACTCC GGATTTGACT TAGAAGAAGA AGAGGAGGAA GTAGGAAGAT CAGAATTCGA AGACGCGGCG ATGGCAAGAA TTTGTAATTT GGCGACGACC GGAGGGGCAA TTTGGGAATC AGATGGTTGG GTGGAAGTCA GATGCCACTC TTCGGAAGAG GAAGGGACAA GAATGGAATA TTCGGGATCC ACAAGGGTAG TATCGGCATA TAACACATCA TCGGATCCGT ACGATGACGT GCCGATAATT GACGTTTATG TGTTTCCGCC GGGAAACGGG GGATCGGCGG CGGCGCTGCT GCCATATGAA TTAGTGATGG TTTTACATTT ATTAATGGAA ATTACGGTTT ATACTACATG TGTCTTTAGC AAAATTGTCC TCATTATGAA TTGTTGTTAT CAGTATCATC GTGATAATAA TAACAATAAA CTCGAAACGT TGTCTTTTAA TCACAGCCTC AAGTTTTGTT TGTTTGCACA TCCGACAAAA CTATCTTTTA CGCGCGAACA ATTGAATTCA CGAGGAAATC TCAGTAATAC TATGGCGACC AACGAACCCG AGCACGAGCA CAGAGACGAG GAAGAGGCCG GAGCTAACGA GGATGAGGAC ACCGGAGCTC AGGTCGCTCC GATCGTTAGG CTTGAGGAGG TTGCCGTCAC TACCGGCGAG GAAGACGAAG ACGCCGTCCT CGATCTGAAA TCAAAGCTGT ATCGGTTCGA TAAGGATGCG AATCAGTGGA AAGAGAGAGG AGCTGGTACT GTCAAGCTCT TAAAGCATAA AAACACTGGG AAGATTCGTC TCGTTATGAG GCAATCGAAA ACTTTGAAGA TCTGTGCTAA TCACTTCGTT AAATCGGGCA TGAGTGTTCA GGAGCACGTT GGGAATGAAA AGTCATGTGT GTGGCACGCT CGTGACTTTG CTGATGGTGA ACTCAAGGAT GAGCTTTTCT GTATCAGATT TGCTTCAATT GAGAATTGCA AAACATTTAT GCAAAAGTTC AAGGAAGTTG CTGACTCTGA AGAAGAGAAA GAAGAGAGCA AAGATGCCTC TGACACTGCT GGTCTTCTTG AGAAATTGAC TGTGGAAGAG ACAAAAACAG AGGAGAAAAC CGAATCAAAA GCTGTGGAGA CGGCGAAGAC TGAAGTGAAA GCAGAAGAAA AGAAAGAGAG CGAGGCAGAG AAATCTGGTG AAGAAAAGAA AATTGAAGAA ACTGGTCCCT CAACTTAA 
Length2118
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2443367.. 2446507
Download Sequence
A.thaliana
AGI-codeAT1G07150.1
Descriptionmitogen-activated protein kinase kinase kinase 13
TAIR curator summarymember of MEKK subfamily
Alias[MAPKKK13][mitogen-activated protein kinase kinase kinase 13]
Gene coexpression
MR
MR Locus Description
2 Ahg949638 nucleotide binding protein 35
5.38516 Ahg922661 GF14 protein phi chain
5.47723 Ahg332329 ABC transporter family protein
9.94987 Ahg496310 GroES-like zinc-binding alcohol dehydrogenase family protein
16.2481 Ahg474940 conserved peptide upstream open reading frame 23
18 Ahg496924 succinate dehydrogenase 1-1
19.799 Ahg477362 DEAD box RNA helicase 1
20.3961 Ahg493655 Tyrosine transaminase family protein
21.2838 Ahg471361 Plant protein of unknown function (DUF863)
21.6564 Ahg474773 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression