| Annotation |
|---|
| Description | jgi|Araly1|474957|fgenesh2_kg.2__87__AT1G63990.1 |
| Sequence |
AAAATGGAGG AAAGTTCAGG ACTATCATCG ATGAAGTTCT TCTCCGATCA ACACCTCTCT TACGCTGACA TTCTTCGTCC TCACGAAGCT CGTGCTAGAA TCGAAGGTTC TGTTCTCAAT CTTTTCCGAA TTTTGAATTC TCCAGATTCA GCCATCTCCG ATCTCTCTCT GATCAATGGG AAGAGAAGCA ATAGTTGTAT AAACCAAGGG ATACTCACAG ATGTTTCATA TATATTCCTC TCTACTTCAT TTACTAAGAG TTCATTGACG AATGCTAAAA CAGCTAAAAC TTTTGTTCGT GTGTGGAAAG TTATGGAAAT ATGCTTCCAG ATTCTGCTCC AAGAGAAACG AGTGACACAA AGAGAGCTCT TCTATAAATT GCTTTGTGAT TCACCTGATT ATTTTTCATC TCAGATTGAA GTTAACAGAA CTGTCCAAGA TGTGGTAGCA CTCCTACGTT GCAGTAGATA CAGTCTTGGG ATTATGGCTT CTAGCAGAGG CCTTGTTGCT GGAAGGTTAT TTCTACAAGA ACCAGGTAAG GAAGCTGTAG ATTGTTCGGC CTGTGGTTCT TCAGGTTTCA CTATAACCGG AGACTTGAAT TTGCTAGACA ACACCATCAT GAGAAGTGAT GCACGGTATA TCATTATTGT GGAAAAGCAT GCGATTTTTC ATCGGCTTGT GGAAGATCGT GTGTTCAATC ACATTCCTTG CGTGTTCATC ACTGCGAAAG GGTATCCGGA TATTGCCACA AGGTTTTTCC TTCACCGGAT GAGCACAACA TTTCCTAATC TGCCAATTCT TGCTCTAGTA GATTGGAATC CAGCTGGGTT AGCTATACTA TGCACCTTCA AGTTTGGAAG CATAGGAATG GGTCTTGAAG CATACAGATA TGCTTGCAAT GTGAAGTGGA TTGGTCTCCG AGGAGATGAT CTGAATCTGA TACCAGACGA GTCTTTGGTT CCCTTAAAGC CAAAGGATTC ACAGATTGCT AAGAGCTTAT TGTCCTCCAA AATCTTGCAG GATAACTACA GAGACGAGTT GTCACTGATG GTGCAAACTG GTAAAAGAGC GGAAATTGAA GCTCTGTATT GTCATGGTTA TAATTATCTC GGTAAATATA TAGCCACCAA GATCGTGCAG GGCAAATACA TATAACAAAT CAAACACCAG CATGTAAGAT TTTCTACCAA TTTATATTGG TTCTAAATAT AAGGTTACTT ATTCAGGTGA AGTTTTATGC AAACTCTCAT GGAATGTATA AATAGATTAC AAACAAATCA AAATTTTCCA AATTGAAGGA TGATATTTGT TTACATACGG CATGGTGATG AATTAGTAAC AAAACTTGTC CTAATCTCCA CTTTCCTATG CAGGTATAAT GATAATTTCA ACCAAAAATT GTGCTCACTT CTTGCTTGAT ACAAGACTAA TCTTCTTTCC GTCCACAACA AACTTGCCAC TTCGCACCAG CTGCAACAAA GACGTTAGAA CAACATCAGT AAGAATGATA AACTTTGGAA CTTTCTGTAG TAAATATGAG AAACTCACTA TAAAAACACT TCTTTAATCT CAAATTTAAT GAAT |
| Length | 1584 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 515545.. 517697 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G63990.1 |
| Description | sporulation 11-2 |
| TAIR curator summary | Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. Required for double-strand break induction. |
| Alias | [SPO11-2][sporulation 11-2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 32 |
Ahg923663 | Ubiquitin-conjugating enzyme family protein |
| 36.4417 |
Ahg944158 | methionine aminopeptidase 1D |
| 40.4969 |
Ahg478229 | phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) |
| 43.3128 |
Ahg311904 | |
| 44.2267 |
Ahg913611 | |
| 53.7401 |
Ahg476900 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 80.8703 |
Ahg496591 | Inositol monophosphatase family protein |
| 87.6698 |
Ahg485468 | Protein of unknown function (DUF3353) |
| 88.5438 |
Ahg314258 | nodulin MtN21 /EamA-like transporter family protein |
| 88.8088 |
Ahg951277 | Phosphoglycerate mutase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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