| Annotation |
|---|
| Description | jgi|Araly1|478229|fgenesh2_kg.3__930__AT3G09150.2 |
| Sequence |
AAGAATTGAA GAGAGTGTCG GAGGAAGGAG ACCTTGAGTT ATCAATTTGT GATTGTTGTT GTAATGGCTT TGTCAATGGA GTCTGGATTT TCAATTGGGT CGTGCTTCAA GGCACCAAAC CCTCCTGTTC TAATCTCTGC AAGCCCTAAG AAGATCAATT TCACGTCGAG AAGGAGAAGT AAAAGATTCT TATTTAGAGT CTCTGCTGTT TCCTACAAGG AATTCGCAGA GTCTGCTTTA GAAGAAACCA GGAAAAAGAT CGTTCTTGAA CCTTCACATC TCCAGGAAAA GTATAGTAGC ATGACAGGAT TGGATGGGAG GACGGAACTT CGAATGCTTG CTTTTAAATC TTCAAAGATT AGACTCTTGC GGAGTATGGC AATAGAGAAT GAGACAATGC AGGTCTTTGA CTTTGCAGGT TTCATGGAGC CTGAGTATGA TACTCCCATA TTCTGTGCTA ACTTCTTCAC ATCTGCCAAC GTGAACATAG TTGTATTGGA CCTTAATCCT TTGCATCAGC TGACTGACCA GACGGATTAC CAAGACAAGT ATTATAACAA GATCATGTCC ATATATCACA AATATGCTGA GACTTTCCCA TGGGGAGGGA AATTGACTGG TGAATCCATA AAGTTTTTTT CGCCTTTGGT GATGTGGACC AGGTTTTCGT CTAGCCAAGA AAAACATAAG GCTTTGTTCT CTGCGTTTCT CGAGTACTAC CAGGCATGGC TTGAGATGAC AATCCAAGTG AGGGAGGAGA TGGAACCATC TCAGGTGATA GCCAATTGTG AAGCACAACA CAAGTACCTG ACATGGCGAG CACAAAAGGA TCCTGGACAT AGTCTTCTTA AAAGATTAGT TGGTGAAGCA AAGGCAAAGG AGCTGCTAAG GGATTTCCTG TTCAATGGGG TCGATGAGTT AGGCACAAAA ACATTCATTG ATTACTTTCC AGAGTACCAA ACAGAAGATG GAACTGTAAG CGATAAACGA AGTATCATTG GGAAGTCATA TGAAACTCGG CCATGGGATT TAACAGGACA ATTTATCAGC TAACAATGAA TATATGTGAA CAAGTTCGAT TTCAGAGTCA TCAACACAAG AGGAAGTGAA CTTAGGGAAG TAGGAATAAA AAAGAGCAGC ATGATGAGGA GTCTCTCAGG TCTATCTCCA TCTCAAGATG ATTGTTTGAC TTACCATGCA TTGTAGTTTA ACAAGTATTA CAAGTGTAAC TCTCAGCCCT TCATCAAAAG GAGAATTCTC GAGTATGATA TGATTTTAAT GAAAA |
| Length | 1285 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3408073.. 3415472 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G09150.2 |
| Description | phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) |
| TAIR curator summary | Required for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. |
| Alias | [ATHY2][GUN3][HY2][ARABIDOPSIS ELONGATED HYPOCOTYL 2][GENOMES UNCOUPLED 3][ELONGATED HYPOCOTYL 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.30662 |
Ahg472287 | Spc97 / Spc98 family of spindle pole body (SBP) component |
| 12 |
Ahg492007 | NAD(P)-binding Rossmann-fold superfamily protein |
| 18.4391 |
Ahg474214 | electron transfer flavoprotein alpha |
| 19.1311 |
Ahg933740 | RAP |
| 21.4942 |
Ahg922605 | Domain of unknown function (DUF1985) |
| 24.6779 |
Ahg332523 | Dihydroneopterin aldolase |
| 29.0517 |
Ahg945400 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
| 29.1548 |
Ahg947135 | chromosome-associated kinesin-related |
| 29.3939 |
Ahg930126 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
| 33.6303 |
Ahg485607 | TatD related DNase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|