| Annotation |
|---|
| Description | jgi|Araly1|475431|fgenesh2_kg.2__561__AT1G58200.2 |
| Sequence |
GGTTAATGAA GCTGCCACGA ATTGGCGTAT TTTAGATAGA CACGTCAAAG CTCCTCCTCG CGCACGTTAG CTAACGTCAT GTCTTGTAAC AAAGAAAGAA ACTAATCAAC AAGAAGAAGA AGAAGAAGAA GAAGAAGAAG CTCACCGTTT CTCTCCGATT CTATCCACTG ATCTTCTCCG ATTGCTACTT GCTTCTTTTT GTTTGCTTCC GATCTCTCTC GATTTCTCAA TTCCGTACGG AGTAGGTTAA TTTTGTATAA AGGAGATTAG TTTATCATTG TTTTGTACAT TTGGGATGAT GATGCGTACT GTCTCTTTGC CATTGTCTCA TGATCTCAAT GTTCATAAGA TCCATGAAGC TTCTGGATAC CATAATAGTG CAGCTGCTAA AAATCGTGTG TATCTGACTC GGACTGGTCT TTCATCATGT GCTACGAGAC AAGACGTTTG GAGTCTTCAG CTTCTAGAGA GCTTTAGTGG TTCAAAAGTA CCTGTATCAT CTAGGTGTAA TGCATTCGTT TGCCGGTCAG CTCTCTTTCC CGGGAATGGA AATGAAGGCC CTATTCTTAA ATCAACTGCA GTAATATTCA CAAGGGCATA TGATGCTTTA CGCGGAAATC ATTTAATGAA ACTAATTCCA GCAGTTGGGA TTCTTGCATT TGCTACATGG GGTCTTAGAC CCCTTCTGCG CCTTGCCAGA GCTACCCTGT TTGAGAAGGG GAATGATGCA AATTCACAGA AGAGTAGCAC ACAATACATT GTTGTGTCAT ATCTTCAGCC TTTGCTGCTT TGGAGCGGAG CTATCCTTCT ATGCAGAACA TTGGACCCAA TAGTATTGCC TTCAAGTGCC AGCCAGGCTG TTAAACAGCG TCTTCTGACC TTTGCTCGGT CCATGTCAAC GGTGTTGGCA TTTGCTTGCT GTTTATCAAG CCTACTTCAG CAGGTGCAGA AATTTTTTAT GGAGACAAAT AATCCTGCTG ATACCAGAAA TATGGGTTTC AGTTTTGCTG GAAAAGCTGT TTACACTGCT GCGTGGGTTG CTGCTGCTTC ATTGTTTATG GAGCTGTTGG GCTTCTCTAC CCAAAAGTGG CTAACGGCTG GGGGTCTGGG GACAGTACTG CTAACTCTTG CTGGTCGTGA GATACTTACA AACTTTCTTT CAAGCATTAT GATTCATGCT ACACGGCCCT TTGTTCTGAA TGAGTGGATC CAGACCAAGA TAGGAGGCTA TGAAGTTTCT GGCACAGTAG AGCGTGTCGG TTGGTGGTCA CCTACAATTA TCAGAGGTGA TGACCGTGAA GCAGTTCATA TTCCTAACCA CCAGTTTAGT GTAAATATTG TGAGAAATCT AACTCAGAAG ACGCATTGGC GCATCAAAAC ACATCTTGCC ATCAGTCATC TTGATGTCAG CAAAATTAAT AATATCGTAG CTGATATGCG CAAGGTGTTG TCTAAAAATC CTCAAATCGA GCAGCAAAAA ATACACAGAA GAGTCTTTTT GGAAGATATA GATCCAGAGA ACCAAGCACT GAGGATCCTA ATATCATGTT TTGTAAAGAC TTCACGTTTT GAAGAATACC TGTGCGTTAA GGAAGCAGTG CTCTTGGATC TTCTTACTGT TATTAGGCAT CACGGGGCAC GTCTAGCAAC TCCCATTAGA ACAGTACAGA GGATGCGTAA TGAGGCTGAG GTGGACAGTG CAGGATTTTC AGACATCATT TTCAATCAAG CAGCGATGAA CCGTCGATTC ATGCTGATTG AGCCTTCCTA TAAAATAAAC AGCGATGATA ACTCAAAGTC TCCCTCACCC AGCCCAGGGC AAAAGAGTGA AGAAAGGGAC CTTCAAGAAG AACCATCGGA AACCAAGGCC GAAACAGAAA ACAACGGATC AGCGTCAGTG CTGATTTCAA ATGCCAAAAA AGAGAAACAG AAAACGGCTC TTGGTTCCAA CTCCAGTACA GGCACTAAGG GTTCACCAAC CTCAACATCC GACCAGCCAG TAGCACAAAA GTCAGAAGAA AAGAAGAAAG AGAGCGTGGG AGATTCAAAT AAAGCAGAGA AGGATGAAGT TTATGATGAC GAAGGTACAA CAGAGCAGAC ATTGAAATCA AAAGCAAGAC AAGTGACTGA AAAGAGCAGT GGAGATTCGA AAGCTCGAGA TGGTGGTGGG TCTGGTACAA GTTCTTTTCT GGAGGAGAAC CTTGTTCTGG GTGTTGCATT GGATGGCTCA AAACGTACAC TCCCGATTGA TGAAGAAGTC AAAGCATCTG GTGCATTAAT GGATTCTGAA GAACTTGGTA TAGGATCAGA ATGAGTAGAC GGAGAAGAGG TACAAAAAAA TTTGTGTTCC AAGCAATTTA ATGCATCTGT AGAAAGTAAC AAACAGAAAT GGAGAAATGA GCGCGACTCT GTTAATTTTT TTAATCGTAG AGGTTTGCGC CATTTCATCT CTGTAAATAA ACTAGCGATT CAAAAACTAA AAAGTAGTTT GT |
| Length | 2492 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 4115837.. 4120670 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G58200.1 |
| Description | MSCS-like 3 |
| TAIR curator summary | A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity. |
| Alias | [MSL3][MSCS-like 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.4403 |
Ahg907175 | Glycosyl hydrolases family 32 protein |
| 11.225 |
Ahg488615 | RGA-like protein 3 |
| 18.4391 |
Ahg472278 | OPC-8:0 CoA ligase1 |
| 28.775 |
Ahg928294 | Plant neutral invertase family protein |
| 28.931 |
Ahg491942 | Protein of unknown function (DUF1421) |
| 31.4643 |
Ahg907291 | S-locus lectin protein kinase family protein |
| 33.2866 |
Ahg471294 | Pyridoxal-5'-phosphate-dependent enzyme family protein |
| 37.9473 |
Ahg492412 | Phosphorylase superfamily protein |
| 50.6952 |
Ahg476379 | jasmonate-zim-domain protein 6 |
| 56 |
Ahg489781 | Arginase/deacetylase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|