Detail



ID : Ahg488615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488615|fgenesh2_kg.6__1749__AT5G17490.1
Sequence
ACATGCGAAA TTATAATGGC CTGCCTCTCT TTTACTTACA CTCTCCAGGT CTCTCACTTC CCTCATTGGA CCTCTCCTTC TTCTGTTTAA ATTCGTCTCC TTTCTTTCCA CAATTTTTGC CTAACCAACA CCAAAAAAAA AATTCAACAT TTCTTGACGA TGAAACGAAG CCATCAAGAA ACCTTCGTAG AAGAAGAAGC TCCGTCAATG ACGGAGAAGC TAGAAGGTAG TGGTTGTGGT GGTGGAGACG ATAACATGGA CGAGCTTCTT GCTGTTTTGG GCTACAAGGT TCGATCTTCA GACATGGCTG ATGTTGCACA GAAGCTTGAA CAGCTTGAAA TGGTCTTGTC CAATGATATT GGTTCTTCTA ATAATGCCTT AAACGACACT GTTCATTACA ATCCTTCTGA TCTCTCCGGT TGGGCTCAGA GCATGCTCTC CGAGCTTAAC TACTACCCGG ATCTCGACCC GAACCGGATT TGCGATCTGA GACCAATCCA AGACGACGAC GAGTGTTGCA GTAGCAGTAA CAGCAACAAG AGGATTCGAC TCGCTCCTTG GTATGACTCA GTGAGCAGCG ACTCAACTCG TTCCGTCGTC CTTATCGAGG AGACCGGAGT CAGACTCGTC CAGGCGCTAG TGGCCTGCGC CGAGGCGGTC CAGCATGAGA ATCTGAGCCT CGCGGATGCT CTCGTGAAGC GCGTGGGATC ACTCGCGGCT TCTCAAGCGG GAGCGATGGG GAAAGTCGCC ACCTACTTCG CCGAAGCCCT AGCTCGTCGG ATTTACCGGA TTCATCCTTC CTCCGCCGCC ATTGATCCTT CCTTTGAAGA GATTCTTCAG ATGAATTTCT ACGACTCGTG TCCTTACCTC AAATTCGCTC ATTTCACAGC CAATCAAGCG ATTCTAGAAG CCGTTACGAC GTCGCGTGGC GTACACGTTA TCGATCTAGG GCTTAATCAA GGGATGCAAT GGCCGGCGTT AATGCAAGCC TTAGCTCTCC GACCCGGTGG TCCTCCGTCG TTTCGTCTCA CCGGCGTTGG GACTCCGTCG AATCGTGACG GGATTCAAGA GTTAGGTTGG AAGCTAGCTC AGCTGGCTCA AGCCATCGGC GTCGAATTCG AGTTCAATGG TCGAACGACG GAGAGATTAT CCGATTTGGA ACCGTATATG TTCGAGACCC GACCCGAGTC GGAGACTTTA GTGGTTAATT CGGTTTTCGA GCTTCACCCG GTTTTATCGC AACCCGGTTC GATCGAAAAG CTGTTAGTGA CGGTTAAGGC GGTTAAACCG AGTATCGTAA CGGTGGTGGA ACAAGAAGCG AACCATAACG GCGCCGTTTT CTTAGACCGG TTTAACGAAG CGCTACACTA TTACTCGAGC TTGTTTGACT CGCTCGAAGA TGGTGTTGTC TTACCGAGTC AAGACCGAGT CATGTCGGAG ATTTACTTAG GGAGACAGAT TTTGAACGTG GTGGCGGCGG AAGGAATTGA TCGGATCGAG CGGCATGAGA CACTGGCTCA GTGGCGGAAA CGGATGGAAT CCGCCGGGTT TGACCCGGTT AATCTCGGAT CAGACGCGTT TAAGCAAGCG AGTTTGCTAT TGGCGTTATC TGGCGGCGGA GATGGATACA GAGTGGAGGA GAACGACGGA AGCCTTATGC TTGCGTGGCA GACGAAACCG CTCATCGCCG CATCGGCGTG GAAACTGGCG GTGGAGTTGC GGCGGTAGAG ATTACGTCAT AGATAAAAGA AATAAAATTT GCAAAAACGT GACCTTTTAT GTTTTTGTTT TACTTTGACG TACCCCACTA GTTTCGTTTT ATGACAATTT CGCCCGAATT ATTCCTTGCT TTTACTTTTG GGACCCAGTT GGTTCGTTGG TCGTCGAGCG AGATTCGAAA ATGAGGAACA TGTGTGCATG TAACAGCACG AGCTAGTGTT TTGATTGTTT GAATAAA 
Length1957
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6894232.. 6896290
Download Sequence
A.thaliana
AGI-codeAT5G17490.1
DescriptionRGA-like protein 3
TAIR curator summaryDELLA subfamily member involved in GA signal transduction
Alias[AtRGL3][RGL3][RGA-like protein 3]
Gene coexpression
MR
MR Locus Description
11.225 Ahg475431 MSCS-like 3
17.8885 Ahg488487 O-acyltransferase (WSD1-like) family protein
18.3848 Ahg485421 BES1/BZR1 homolog 1
18.7083 Ahg327803 ACT-like protein tyrosine kinase family protein
20.445 Ahg492412 Phosphorylase superfamily protein
23.2379 Ahg922353 Basic helix-loop-helix (bHLH) DNA-binding family protein
30.3315 Ahg928294 Plant neutral invertase family protein
34.5832 Ahg471148 glutathione S-transferase TAU 18
44.7214 Ahg472064 alpha/beta-Hydrolases superfamily protein
44.9444 Ahg926720 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression