Detail



ID : Ahg475593

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475593|fgenesh2_kg.2__723__ATCG00270.1
Sequence
ATGACTATAG CCCTTGGTAA ATTTACCAAA GACGAAAAAG ATTTATTTGA TATTATGGAT GACTGGTTAC GGAGGGACCG CTTCGTTTTT GTAGGTTGGT CTGGTCTATT GCTCTTTCCT TGTGCCTATT TCGCTTTAGG GGGTTGGTTC ACAGGTACAA CCTTTGTAAC TTCATGGTAT ACTCATGGAT TGGCCAGTTC CTATTTAGAA GGTTGCAATT TTTTAACCGC TGCAGTTTCT ACTCCTGCTA ATAGTTTAGC GCATTCTTTG TTGTTACTGT GGGGTCCTGA AGCACAAGGA GATTTTACTC GTTGGTGTCA ATTAGGTGGT CTATGGGCTT TTGTTGCTCT CCACGGCGCT TTCGCATTAA TAGGTTTTAT GTTACGTCAA TTTGAACTTG CTCGATCTGT TCAATTGCGA CCTTATAATG CAATCGCATT CTCTGGTCCC ATTGCTGTTT TTGTTTCTGT CTTCCTAATT TATCCACTAG GTCAATCTGG TTGGTTCTTT GCGCCTAGTT TTGGTGTAGC GGCTATATTT CGATTCATCC TCTTTTTCCA AGGGTTTCAT AATTGGACAT TGAACCCATT TCATATGATG GGAGTCGCCG GTGTACTGGG CGCGGCTCTG CTATGCGCTA TTCATGGTGC TACTGTAGAA AATACTTTAT TTGAAGATGG TGATGGTGCA AATACATTCC GTGCTTTTAA CCCAACTCAA GCCGAAGAAA CTTATTCAAT GGTCACCGCT AACAGCTTTT GGTCACAAAT CTTTGGGGTT GCTTTTTCCA ATAAACGTTG GTTACATTTC TTTATGTTAT TTGTACCGGT AACTGGTTTA TGGATGAGTG CTCTTGGAGT AGTCGGTCTA GCTTTGAACC TACGTGCCTA TGACTTCGTT TCCCAGGAAA TCCGTGCAGC GGAAGATCCA GAATTTGAGA CTTTCTATAC TAAAAATATT CTTTTAAACG AAGGTATTCG TGCTTGGATG GCGGCTCAAG ATCAGCCTCA TGAAAACCTT ATATTCCCTG AGGAGGTTCT ACCACGTGGA AACGCTCTTT 
Length1060
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8548573.. 8549632
Download Sequence
A.thaliana
AGI-codeATCG00270.1
Descriptionphotosystem II reaction center protein D
TAIR curator summaryPSII D2 protein
Alias[PSBD][photosystem II reaction center protein D]
Gene coexpression
MR
MR Locus Description
1.41421 Virus0862
3.87298 Virus1719
6.9282 Ahg927757
10.3923 Ahg906697
14.5945 Ahg486735 ADP-ribosylation factor A1E
17.6635 Ahg935743
20.199 Ahg928699
24.3926 Ahg887777 NAD(P)-binding Rossmann-fold superfamily protein
25.3377 Ahg948992
28.775 Ahg944321 RPM1-interacting protein 4 (RIN4) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression