Detail



ID : Ahg486735

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486735|fgenesh2_kg.5__2727__AT3G62290.1
Sequence
CTCCTCTCAC GTTCGAAGAC CATTTCTTGT TCTTTGGACG ACCATCGGCG ACAGTGTTAA GTCTAGGTCT TCTTCTTCGG CGTAGTTTTT TTCCCGCTTT GAAATATGGG GCTGTCCTTC GGAAAGTTGT TCAGCAGGCT CTTTGCAAAG AAAGAGATGC GTATCCTCAT GGTGGGTCTC GATGCTGCTG GTAAGACTAC GATCCTGTAC AAGCTCAAGC TTGGAGAGAT TGTGACTACG ATCCCAACCA TTGGTTTCAA TGTGGAGACT GTGGAATACA AGAACATTAG CTTTACTGTG TGGGATGTCG GGGGTCAAGA CAAGATTCGT CCATTGTGGA GGCACTACTT CCAGAACACT CAGGGACTTA TCTTTGTGGT GGACAGCAAT GATCGTGACC GTGTTGTGGA AGCCAGGGAT GAGCTTCACA GAATGTTGAA CGAAGATGAG TTGAGAGATG CTGTGCTCCT GGTCTTTGCT AACAAGCAAG ATCTTCCAAA TGCGATGAAC GCCGCTGAGA TAACTGACAA GCTTGGACTT CACTCACTCC GTCAACGACA CTGGTACATA CAGAGCACAT GTGCTACCTC CGGAGAAGGG CTTTATGAGG GACTTGACTG GCTCTCTAAC AACATCGCAA ACAAGGTATA TATACCAAGT TTTAAAAACG CTTAGGCTTA GGAGAGCATT GTGTGGTTTG GTTTTAATCG AGGAGAGTCT TGTCTTCTTC GTCTCTCTCT TTTGTTCTTT CTTCTCAAAC TCTTTATCAT TTCATACTCT TTGTTCTTTG CTCTAATAAA TTCACGAGTT TTTTTTTCCT TTTTTCTTTT ATCCTATAAT TCAGAGTTTC AGACGCTTAT AAAATGGGGC CCAATTTAGG CGGATATTCC AATTTCTTTT T 
Length901
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9889163.. 9891177
Download Sequence
A.thaliana
AGI-codeAT3G62290.1
DescriptionADP-ribosylation factor A1E
TAIR curator summaryA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
Alias[ARFA1E][ATARFA1E][ADP-ribosylation factor A1E]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg475602 ribulose-bisphosphate carboxylases
4.3589 Virus0862
7.74597 Ahg911166 Defensin-like (DEFL) family protein
11.8322 Ahg925560 RNA polymerase subunit alpha
14.5945 Ahg475593 photosystem II reaction center protein D
15 Ahg895580
15.4919 Ahg473322 structural constituent of ribosome
15.8745 Ahg891917
15.8745 Virus0379
17.0294 Ahg894590
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression