Detail



ID : Ahg475635

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475635|fgenesh2_kg.2__765__AT1G65410.1
Sequence
ATGCTTTCGT TATCCTCTTC TTCTTCGTCA TTACTTCGTC CGAGTTCTTC TTCTGGTCCG TCCATCGTTG TACCAAGAAG GAGTTTTATC TCGTTTCGTC GGAAAGTCTC TTGCTGTTCC ATAGCCCCAC CTCAGAACCT GGACAACGAT GCCACCAAAT TCGATAGTCT TACCAAGTCT GGAGGAGGTA TGCGTAAACA GCGAGAGCTT GAGAATGATT CTGATGTTCT TATAGAATGT CGAGATGTCT ACAAATCGTT TGGGGACAAA CATATCTTGA AAGGTGTTAG CTTTAAGATT AGACATGGTG AAGCTGTTGG GGTGATCGGT CCTTCTGGGA CTGGAAAATC AACCATTTTA AAGATCATGG CTGGTCTTCT TGCTCCAGAC AAGGGAGAAG TTTATATACG AGGAAAAAAA CGAGCTGGTT TGATAAGTGA TGAGGAAATA TCAGGACTTC GTATTGGCCT GGTATTTCAG AGTGCAGCTC TCTTTGATTC TCTATCAGTT CGTGAAAATG TTGGTTTTCT ACTTTATGAA AGATCAAAAA TGTCCGAGAA TCAAATATCT GAGCTTGTGA CACAAACCTT GGCAGCTGTT GGTTTGAAGG GGGTTGAGAA TCGATTACCT TCTGAGCTAT CTGGTGGAAT GAAGAAAAGG GTTGCTTTAG CTCGTTCACT AATTTTTGAT ACAACGAAAG AGGTCATAGA GCCAGAGGTG CTTTTGTACG ATGAGCCAAC TGCTGGACTT GATCCAATTG CATCAACTGT AGTTGAAGAT CTTATACGGT CTGTTCACAT GACGGACGAT GATGCAGTTG GAAAACCTGG AAAAATTGCC TCTTATCTGG TTGTTACCCA TCAACATAGC ACCATTCAAA GAGCTGTGGA CAGGTTATTG TTTCTGTACG AAGGAAAGAT CGTTTGGCAA GGAATGACAC ATGAATTTAC AACCTCAACA AATCCAATAG TTCAACAGTT TGCTACAGGC AGCCTCGATG GACCAATCAG ATACTAGCGG AGGGAACGCA AGCCTAGGCA TGGCTGGCAT ACATTAAGAT TCTAAACAAA GTGTTGAAAG TGATTCTACT TGTAAACACT CTTTGATCTT AGATGCATAG ATCAGGAAAG CATTGTAAGT TGAGATATCA TTACGCATCA ATGAGAAGGT TTAATGTGCC AAGAACAAGA CCTGCATTCT CAGACGTATT CCAACAAAAC TGAAACTTTT AATTGA 
Length1236
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8771631.. 8774217
Download Sequence
A.thaliana
AGI-codeAT1G65410.1
Descriptionnon-intrinsic ABC protein 11
TAIR curator summaryEncodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.
Alias[ABCI13][ATNAP11][NAP11][TGD3][ATP-binding cassette I13][non-intrinsic ABC protein 11][TRIGALACTOSYLDIACYLGLYCEROL 3]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg476640 lysophosphatidyl acyltransferase 4
12.4499 Ahg479178 Protein phosphatase 2C family protein
13.0767 Ahg941232 Protein prenylyltransferase superfamily protein
20.2731 Ahg482652 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
21.9089 Ahg947595
25.8844 Ahg479498 Protein of unknown function (DUF177)
44.8776 Ahg900811 GCN5L1 family protein
49.9199 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
51.4393 Ahg494917 histidine triad nucleotide-binding 3
59.7997 Ahg912447 Family of unknown function (DUF572)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression