Detail



ID : Ahg900811

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900811|Al_scaffold_0004_1461
Sequence
ATGTCACTCT CGGCGGCGCG TGGGCGTGTG TTACCGTTTT CGGAGAAGGA GAAAACGGAA GAAGAGTCTG GAACATTGGA ATCGAGTCTC TTACAGCTAA TCGATGACAA TCGTCGATCG TCGTTACAGC TCCGGGAAAA GACCGAGAGA TCGAGGAAGG AAGCGATCAG ACACGCGGCG AGAACGGCGG ATCTGCTAGT GAAGGCGGTG AACGGAGGAG TGGAAGAGTG TTTCGTGAAC GAGAAACGGA TTGAGTCGGA GATTAGGAAT CTTGCGGTTA CGGTGGCGAA ATTCGGCAAA CAAACGGATC AATGGCTTGC CGTCACTCAC GCCGTTAATA GCGCCGTTAA GGAGATTGGA GATTTTGAGA ATTGGATGAA AACTATGGAG TTTGATTGTA AGAAAATCAC TGCGGCAATT CGCAACATTC ATGAAGATCA ATAA 
Length444
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13441183.. 13441810
Download Sequence
A.thaliana
AGI-codeAT2G30330.1
DescriptionGCN5L1 family protein
TAIR curator summaryPutative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport.
Alias[BLOS1][BLOC subunit 1]
Gene coexpression
MR
MR Locus Description
14.3178 Ahg492476 Pleckstrin homology (PH) domain-containing protein
16.4317 Ahg473569 Pseudouridine synthase family protein
18.8944 Ahg322516 cleavage and polyadenylation specificity factor 73 kDa subunit-II
19.8242 Ahg491573 ubiquitin-specific protease 18
31.4643 Ahg945284 GPCR-type G protein 1
36 Ahg494518
40 Ahg492153 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
43.7721 Ahg891510 Disease resistance protein (TIR-NBS-LRR class) family
44.8776 Ahg475635 non-intrinsic ABC protein 11
44.8776 Ahg488891 Domain of unknown function (DUF1767)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression