Detail



ID : Ahg475769

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475769|fgenesh2_kg.2__899__AT3G27430.2
Sequence
TGTTCAATTT AAAAAATGTC GCAATCAACA GTAGATGTTT CGGCAAAGGG TGGGTTTAGC TTCGACTTGT GTAAGAGAAA TGAGATGCTT ACACAAGAGG GTCTTAAAGC TCCGTCTTTC TTGAAGACCG GAACAACCAT TGTCGGTTTG ATTTTCAAGG ATGGTGTGAT ACTAGGGGCA GATACCCGAG CGACCGAGGG GCCCATTGTT GCTGATAAAA ACTGTGAAAA GATTCACTAT ATGGCACCAA ACATATATTG TTGTGGTGCA GGAACCGCGG CTGACACTGA AGCAGTTACT GATATGGTCA GCTCACAGCT GCGATTGCAT CGTTACGAGA CTGGTCGTGA CTCTCGGGTT ATTACTGCTT TAACTCTCCT CAAAAAACAT CTTTTCAGCT ATCAAGGTCA TGTCTCTGCT GCGCTTGTGC TTGGTGGAGT TGATATCACT GGCCCACATC TGCATACTCT ATACCCAAAC GGTTTAACTG AAACTCTTCC ATTTGCTACA ATGGGTTCTG GTTCTCTTGC TGCTATGTCT GTGTTTGAGG CGAAGTACAA AGAAGGCCTA ACTAGGGATG AAGGAATTAA GTTGGTCGCT GAAGCCATAT GCTCTGGTAT ATTCAATGAC CTGGGTAGTG GTAGCAACGT AGACATCTGC GTGATCACAA AGGGGAACAA GGAATACCTG AGGAATTACA TGGAACCAAA CCCAAGAACC TATGTCAGCA GCAAAGGCTA TTCCTTCACC AAGAAAACCG AGGTTCTTCT TACCAAAATC ACCCCATTGC TGGAGCGAGT CGAAATTACA GAAGTCGGTG AAGCTATGGA GGAATGATTC CCATGTTTAA GGATCATAAA AAAACAACTT TC 
Length872
Protein Sequence
Protein Residue
Map Locationscaffold_2: 10970452.. 10972140
Download Sequence
A.thaliana
AGI-codeAT3G27430.2
DescriptionN-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
TAIR curator summaryEncodes 20S proteasome beta subunit PBB1 (PBB1).
Alias[PBB1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg477575 Protein of unknown function (DUF1278)
2.23607 Ahg344248
2.82843 Ahg906167 Phosphofructokinase family protein
4.58258 Ahg916386
6.63325 Ahg901259 Avirulence induced gene (AIG1) family protein
8.24621 Ahg938556 conserved peptide upstream open reading frame 51
8.77496 Ahg943181
10.4881 Ahg321237
10.4881 Ahg905205 LOB domain-containing protein 9
10.583 Ahg895620 receptor for activated C kinase 1C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression