| Annotation |
|---|
| Description | jgi|Araly1|475793|fgenesh2_kg.2__923__AT1G66980.1 |
| Sequence |
TTACTCTATG GTGTTGTTCT GTTACAGCTG TTTGCTGCTC AAATCAATGC TCAAAGATCT ACAAGTACAT GGCAGACGCT GAGTGGTGAA GCTCCACTAG TGATTGCTCG TGGTGGATTT TCTGGACTAT TTCCAGATTC TAGTCTCGCT GCATATCAAT TTGCAATGCA GGCAAGTGTA GACCAAGTTG TTCTATGGTG TGATGTTCAG CTAACTAAAG ATGAAGTTGG GATTTGCTTC CCTGATTTAA ATCTGGCCAA TGCTTCAAAT ATACAAGATG TTTACTCAAC TCGTCGAAAA TCTTACCCGG TTAATGGAGT CACTACTCAG GGTTGGTTCC CCATTGATTT CTCCTTGACA GAGCTCCAGA ATGTTTTGTT TTCCTTGATC CGAGGAATAT TATCGCGCTC AGAAAAATTC GATGAAAATG GATTTGCGAT TTCGACGATT CAAGATGTAA ACACGCAGTT ATTACCAAAA GGTTTTTGGT TAAATATTCA GCACGATGCG TTCTACGAGC AACAAAATTA TAGTATGAGC AGTTTTCTAT TATCAGCTGC AAGAACTGTT TCCATTGACT TCATATCTTC CCCTGAGGTG GGTTTCTTTA GGAAAATTGC TGGCCGTTAC GGGCGCAACG GACCGAGTTT CGTGTTCCAG TTTCTTGGGA AAGAAGATTT TGAGCCGACA ACAAACCGAA CCTATGGTTC TATCTTCAAT AACCTAACAT ATGTCAAGAC CTTTGCTTCA GGAATTCTCG TTCCCAAGTC TTACATATTG CCACTCGATG ACAAACACTA CTTGCTTCCT CCTACATCCT TAGTTCAAGA TGCTCACAAG GCAGGATTAA AACTATATGC GTCAGGTTTT GCAAATGATG TTGATATTGC ATATAACTAC AGTTGGGATC CAGTTTCTGA ATATCTATCT TTTGTTGACA ATGGCGTTTT TTCTGTCGAT GGTGTGCTCT CTGATTTTCC CTTAACTGCA TCTGCATCTG TTGACTGCTT CTCCCACGTT GGCAGAAACG CTACAAAACA AGTGGATTTT CTTGTTATCT CAAAAAATGG CGCGAGTGGG GATTATCCTG GATGTACAAA CTTGGCATAT GAGAAGGCAA TCAGAGATGG TGCTGATGTT ATCGATTGCC CAGTTCAAAT GTCTAGCGAC GGTATACCCT TTTGCGCAAG TTCGATAGAT CTCGCGAACA GCACAACGGT CAACCAAACT CATCTCAGAA ACCGTTCCAT AATTGTTCCT GAGATTAGCT CAGCTGCTGG AATATTTACT TTTAGTCTCA CATGGCATGA GATCCAGAGT TTGACTCCTG CTATCTCAAA CCCGTTTAGG CTTTACAGTA TGTCCAGGAA TCCGAATGAG GGAAATTCTG GGAACCTTAT TTCACTCTAT GAATTCCTAA ACTTGGCAAA AAACTCCTCT TCTCTCTCCG GTGTTTTGAT CAGTCTAGAG AATGTAATAT ACCTAAGAGA GAAGCAAGGA CTCGACGTAG TTAAAGTAGT TCTTAATAGA CTCACGGAAA CTGGTTACAT CTTTGGAACA TTAAAGGTCA TGATTCAGTC TACGACCAGC TTGGTTCTAG TTGACTTCAA GAATCAGAGC AAGTACGAGA CTGTCTACAA AATTGAAGAA ACCATTGGTA ATATTCGTGA CTCGGCCATT GAAGACATAA AGAAATTCGC TAACGCTGTT GTCATCAACA AAGATTCAGT TTCTCCTAAC TCTGAATCGT TTGTCACGGG GCAAACAAAT GTTGTGGAGA GGTTGCAGAA GTCTCAGCTC CCGGTTTATG TGGAACTGTT TCGGAATGAG TTTGTCTCTC AACCATATGA CTTCTTCGCT GATGCAACTG TTGAGATAAA CACATATATC TCTGGACACG GTATCAATGG AACCATCACA GAGTTCCCTT TCACAGCTGC AAGATACAAA AGGAATCGAT GTTTGGGTAG AAAAGAAATT CCACCTTACA TGTTACCTAT TCAACCCGGT GGCCTCTTAG CCATTATGAA TCCTCTGGCC TTACCTCCAG CCCAAGCTCC AAACCCGATT TTCACATATG ATGATGTCAC TGAGCCACCA CTACCTCCGG TTATAGCAAA ATCCCCAACC TCAACCCCTG GAACATCATC AACCATTGCA AAACCTCTAA TTTCATTGTC AGCAGCAGGA GTTGTATTGT TCCTGGTCTT ATTATCATTA ACATTCTGTT TTCTCCGAAA GAGAGAAACA CAGCTGAGAC AACAGAAGCT GAAGGCTCTT ATTCCACTGG AACACTATAC TTATGCACAG GTGAAGAGAA TTACAAAGTC ATTTGCGGAA ATTGTTGGGA GAGGCGGATT TGGAATTGTT TATAAAGGAA CACTTAGTGA TGGCCGTGTG GTTGCGGTTA AGGTCTTGAA AGACTCAAAA GGTAATGGTG AAGACTTCAT GAATGAGGTT GCGAGCATGA GCAGAACTTC TCATCTCAAC ATTGTTTCCT TGCTTGGTTT CTGCTCAGAA GGTTCCAAAA GGGCAATTAT ATATGAGTTT TTGGAAAATG GGTCACTTGA TAAGTTTATC TCAGGCAAGA CCTCCGTGGA TATGGATTGG ACGACACTAT ATAGAATTGC GCTAGGAGTT GCCCGTGGTT TAGAGTACTT GCACCATAGC TGCAAAACAA GGATTGTACA TTTTGACATT AAACCACAAA ATGTACTCTT AGATGACAAT TTTTGTCCCA AAGTTTCGGA CTTTGGTCTC GCTAAGCTCT GTGAGAAGAA AGAGAGCATT TTTTCTATGC TGGACACAAG AGGTACCATA GGGTACATTG CACCAGAGAT GATTTCGAGA GTTTATGGGA ATGTGTCGCA CAAATCAGAT GTGTATAGCT ATGGAATGTT AGTCCTTGAG ATAATTGGTG CAAGGAACAA AGAAAAAGCT AATCAAGCCT CTCCTTCTAA CACAAGTTCA ATGTACTTTC CTGAATGGGT ATATAGGGAT CTTGAATCAG GCAAGTCCGG AAGGCATATT GAGGATGGAA TTAACAACGT AGAAGATGAG CTTGCAAAGA AGATGACATT GGTGGGTTTG TGGTGTATTC AGCCTTCTCC GGTGGATCGC CCAGCGATGA ACAAAGTTGT AGAGATGATG GAAGGAAGCT TGGAAGCTCT TGAAGTCCCT CCTAGGCCTG TTTTGCAGCA AATCCCAAGA TCAAATTTTC AAGAATCTTC TACTCTTTCA GAGGAAGTCT CTGTTTACAC AGAAGGATGA TCCAAGAAGC CACCATGGAA CCTATCAAAG CACGAAA |
| Length | 3307 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 11298407.. 11302829 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G66980.1 |
| Description | suppressor of npr1-1 constitutive 4 |
| TAIR curator summary | Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains. |
| Alias | [GDPDL2][SNC4][Glycerophosphodiester phosphodiesterase (GDPD) like 2][suppressor of npr1-1 constitutive 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg475792 | SHV3-like 2 |
| 4.89898 |
Ahg933024 | Ctr copper transporter family |
| 7 |
Ahg490325 | Concanavalin A-like lectin protein kinase family protein |
| 8.7178 |
Ahg473694 | Protein kinase family protein with leucine-rich repeat domain |
| 10.247 |
Ahg473621 | ECS1 |
| 17.4356 |
Ahg473540 | Protein of unknown function (DUF567) |
| 25.04 |
Ahg899688 | |
| 25.0998 |
Ahg479821 | receptor like protein 37 |
| 26 |
Ahg472014 | Major facilitator superfamily protein |
| 26.4575 |
Ahg902514 | Protein of unknown function (DUF630 and DUF632) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|