Detail



ID : Ahg933024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933024|scaffold_401012.1
Sequence
TATCAGAAAC TTATCATACA ATGGATCATG GTAACATGCA TAACATGCCA CCACCACTAT CACCATCATC ATCAATGGCG AATCAAACCA ATTCCGACAT GATCGTGATG CATATGACCT TCTTCTGGGG CAAGAACACG GAGATCCTCT TCTCCGGCTG GCCCGGGACA AGTTCCCGCA TGTATGCTCT ATGTCTCATC GTCGTCTTCC TCCTCGCTGT AATCACCGAG TGGCTTGCCC ATTCTTCGAT CCTTCGTGGC CGTGGCTCCA CCAGCCGCGC CGCGGGGCTC GCTCAGACCG CCGTGTACAC ACTCAAGACA GGCCTCGCGT ATCTCGTGAT GCTGGCCGTT ATGTCCTTTA ACGGCGGTGT TTTCATTGTC GCTATCGCCG GATTCGCCGT TGGTTTCATG CTCTTCGGAA GCACTGCTTT CAAGAACCCC TCTGATGACG AGAAACCCTT CGAAGCTCTC TAGCCGTCGT CAGGCTGCGT TTGCTGA 
Length497
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10071744.. 10072238
Download Sequence
A.thaliana
AGI-codeAT2G26975.1
DescriptionCtr copper transporter family
TAIR curator summary
Alias[COPT6][copper transporter 6]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg475793 suppressor of npr1-1 constitutive 4
5.2915 Ahg496934 Protein of unknown function (DUF677)
21.5407 Ahg477742 indoleacetic acid-induced protein 16
22.2261 Ahg928824 RING/U-box superfamily protein
29.2575 Ahg927692 longifolia2
31.607 Ahg483364 alpha/beta-Hydrolases superfamily protein
35.9166 Ahg482825 cation exchanger 1
36.3318 Ahg476236 Cupredoxin superfamily protein
38.0789 Ahg478899 Leucine-rich repeat transmembrane protein kinase
38.5746 Ahg922817 plastid movement impaired1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression