| Annotation |
|---|
| Description | jgi|Araly1|476433|fgenesh2_kg.2__1563__AT1G73030.1 |
| Sequence |
AACGCGTCGA GATATTTTCC TAAATACAGA GAAAACCCTA AAGTCTCTGT TTTTGCGAAT TTTCTCTACA GATAGATCGA AGCTAATTAT CTAGAGGAAT CGATTCAACA TGGGTAACAC AGATAAGCTG ATGAATCAGA TATTCGATTT GAAATTCACG TCCAAGTCTC TGCAAAGGCA ATCAAGGAAG TGTGAGAAGG AAGAGAAAGC AGAGAAATTG AAGGTGAAGA AGGCGATCGA GAAGGGGAAC ATGGATGGTG CTCGGATCTA CGCTGAGAAC GCCATTCGTA AGCGTAGCGA GCAGATGAAC TACCTCCGTC TCGCTTCTCG CCTGGACGCT GTTGTTGCTC GTCTTGATAC TCAGGCTAAG ATGACCACCA TCACCAAATC CATGACCAAT ATCGTCAAGT CCCTTGAGTC TTCGCTTGCC ACAGGGAATC TACAGAAGAT GTCAGAGACA ATGGATTCAT TCGAGAAGCA GTTTGTGAAC ATGGAGGTCC AAGCTGAGTT CATGGAGAAT GCTATGGCTG GTTCAACTTC ATTGTCCACT CCAGAAGGCG AAGTCAACAG CCTTATGCAG CAGGTTGCAG ATGACTATGG TTTGGAAGTC TCTGTGGGAC TTCCTCAGCC TGCTGGTCAT GCCATTCCTA CTAAGACAGA GGAGAAAGTC GATGAGGACG ATTTGTCAAG GAGGCTTGCA GAGCTTAAAG CCAGAGGATA AGTGCGCTAA CCTACATCCG TGCTTGGACT ACCTGCCACT TTGCACGCGA TCCTTATCGA ATTGTTGCTT CTATTTTCTG CAAACATGGG CGTATTTATG TATATTGCTC ACTTTGAAAT ATGCTTTGTT TATAACTTTA TATAAAAAAC CTTCGTGTGG TTTTAGTTTT TACCATTTTA ATGATATGCT TTCCTTTTGA GTTGTGCATT AAAGAGTGTT TTGCTCAGTC GCTTTTGGTC TCATGGACTA AGATACAC |
| Length | 978 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 14759307.. 14760681 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G73030.1 |
| Description | SNF7 family protein |
| TAIR curator summary | Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein. |
| Alias | [CHMP1A][VPS46.2][CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8 |
Ahg484128 | NADH-ubiquinone oxidoreductase B18 subunit, putative |
| 9.94987 |
Ahg480683 | Senescence/dehydration-associated protein-related |
| 12.9615 |
Ahg496018 | Protein kinase superfamily protein |
| 17.72 |
Ahg932476 | Protein kinase superfamily protein |
| 18 |
Ahg480447 | Tetraspanin family protein |
| 19.1311 |
Ahg487187 | Plant protein 1589 of unknown function |
| 19.7484 |
Ahg479469 | Amino acid permease family protein |
| 21.2132 |
Ahg471429 | Zinc finger, C3HC4 type (RING finger) family protein |
| 23.3238 |
Ahg496456 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 24.5561 |
Ahg328581 | Zinc finger protein 622 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|