Detail



ID : Ahg480683

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480683|fgenesh2_kg.3__3384__AT2G17840.1
Sequence
CCGATTTGAA ATCTCCGACG ACAATGGAAC CCTCCGGCGA CAAGCAAGCT TCATCTCTCT ACCCTACTGT TGACACATCG AATCCCGAAG CTCCTATAAA CCCTACCTCT TCATCATCTA CTAATAATCT CTATCCTTCT CTCGATATGA ATGATCTCGC TCGTAATCTC TTCCCTGAGC AACCGGAGAC GAGTTCCGAT CCCGTTTTGG CTCCTCCTGC AGCGACGGAG GAAGTAATTT TGAAAATCTC CGGCGCGATT CTTCACTTAA TCGACACATC TTACAGCGTC GAGCTCGCTT GCGGCGATCT TTCGATCATC CGTATTGTTC AAGGAGATAA TGTTGTCGCT GTTCTTGCTC GTGTTGGAGA TGAGATTCAA TGGCCGTTGA CTAAGGATGA GAACTCCGTC AAGGTCGATG AGTCTCATTA CTTCTTCACG CTTCGTCCTA CCAAAGAAAT CACACATGAT TCAAGCGACG AGGAAGATGG AGCGAAAAAC ACTAACGAGA TGTTGAACTA CGGACTTACA ATTGCTTCCA AAGGTCAAGA GCATTTGCTG GTGGAGCTTG AGAAGATCTT GGAGGATTAC AGTTGTTTCA CGGTGCAGGA AGTGTCGGAG GAAGCGAAGG AAGCAGGGGA AAAGGTTTTG GATGTGACGG TGGCGAGAGA GACATCGCCG GTGGAGCTTA CTGGAGAGAG GAAAGAGATT GTGGAGAGGC AATGTTCGGC TTATTGGACG ACTTTAGCTC CGAATGTGGA GGATTATAGC GGGAAGGCGG CGAAGCTGAT TGCAACTGGC TCAGGACATT TGATAAAAGG GATTCTTTGG TGTGGAGATG TGACTATGGA TAGGCTAATT TGGGGAAATG GTTTCATGAA AAGGAGGTTG TCAAAGGCTG AGAAGGAGAG TGAAGTTCAC CCTGACACCT TGAAAAGGAT CAGGAGAGTG AAGAGGATGA CCAAAATGAC AGAGAGTGTA GCAAACAGCA TACTGTCTGG AGTCCTTAAA GTTTCTGGAT TCTTCACAAG TTCAGTGGCA AACACCAAAG TAGGAAAGAA ATTCTTTAGT CTTCTTCCTG GAGAAGTCAT CCTTGCATCT CTTGACGGAT TCAATAAGGT CTGTGATGCT GTTGAAGTAG CTGGGAGGAA TGTAATGTCA ACCTCTTCCA CTGTCACAAC TGAACTTGTT GATCACAAGT ATGGTGGTAA AGCGGCTGAG GCAACAAACG AAGGGCTCGA TGCAGCAGGA TATGCGATTG GCACAGCCTG GGTTGCTTTC AAAATCAGAA AGGCTATTAA CCCGAAGAGT GTACTCAAGC CTTCGACGCT TGCAAAGACC GCCATTAGAT CTGCAGCTTC ACAAAAGAAA GCGTAGGAAG GCTTTCCTGA TGAAGCAAAA CAGACTCATT TGTCCTGTTT GTTTGTATCG TCTTGTTGTC TTTTGATACA GAAGTAAAAC TGAAAAGAGG TGTGGATTAG TAGTTGTTGT GAAGTGTTTA TGTTTCTCTA TGAGAATCAT GTAATGTCTC TGAGTTGATA CGGAATATGT GCTGTATGTG TAAGTTGGCC AAATCAAGAT TCCTTGAAAT AGTGAGTGAG TGATTGCATC ATGCATCAGC TAACTAGCAA TGGTAAAAAA A 
Length1641
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21032260.. 21034507
Download Sequence
A.thaliana
AGI-codeAT2G17840.1
DescriptionSenescence/dehydration-associated protein-related
TAIR curator summaryIdentified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.
Alias[ERD7][EARLY-RESPONSIVE TO DEHYDRATION 7]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg334956
3.4641 Ahg333508 Late embryogenesis abundant protein
6.245 Ahg356828 cold regulated gene 27
6.32456 Ahg496297 CCT motif -containing response regulator protein
7.48331 Ahg494776 B-cell receptor-associated 31-like
7.74597 Ahg950508 temperature-induced lipocalin
7.93725 Ahg902253 cold-regulated 15a
8.7178 Ahg493915 PQ-loop repeat family protein / transmembrane family protein
8.94427 Ahg910871 Protein of unknown function (DUF761)
9.11043 Ahg923079 Serine protease inhibitor (SERPIN) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression