Detail



ID : Ahg476509

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476509|fgenesh2_kg.2__1639__AT1G73690.1
Sequence
GTTTACTTTT CAATATTTTC TCCTCAAATG TCGATTCTTT CTGTGATTGC TCTAACGGCT ACTTTTTTCG CCAGAGCATA AGAAACCTCA ACGTTAACGA TAACAAATTG CTTGTAATCT GGTTAGTGAA TTCCGGAGAT GGATCAGCCA AAAAAAGTTG CCGATAGGTA TCTGAAGCGT GAGGTTCTTG GTCAAGGTAC TTACGGAGTC GTCTTCAAGG CTACTGATAC TAAGAATGGA GAAACTGTAG CGATTAAGAA AATAAGACTT GGTAAAGAGA AAGAAGGTGT GAATGTAACA GCTCTTAGAG AAATCAAATT ACTTAAAGAG CTTAAGCATC CACATATAAT TGAGTTGATT GATGCATTCC CTCACAAGGA GAACTTGCAC ATTGTGTTTG AGTTCATGGA GACTGATCTC GAGGCTGTTA TTCGCGATCC TAATCTGTTT CTTTCGCCCG CTGATGTCAA ATCTTACCTC CAAATGATAT TGAAAGGTCT TGAGTATTGC CATGACAAAT GGGTTTTGCA CAGAGATATG AAGCCAAACA ACTTGTTGAT AGGACCCAAT GGACAACTGA AACTTGCAGA TTTTGGGTTA GCTCGTATAT TTGGTAGCCC AGGTCGTAAG TTTACCCACC AGGTCTTTGC TAGATGGTAT AGAGCACCTG AACTTTTGTT TGGTGCAAAA CAATATGGTG GTGCAGTTGA TGTTTGGGCT GCTGGCTGCA TTTTTGCTGA ACTTCTATTA CGCAGACCAT TTCTTCAGGG AAACAGTGAT ATTGATCAAT TAAGCAAAAT CTTTGCTGCC TTTGGGACCC CAAAAGCAGA TCAGTGGCCC GATATGATCT GCCTTCCTGA TTATGTAGAG TATCAATTTG TCCCTGCGCC TTCTTTACGT TCTTTACTCC CAACGGTTAG TGAGGATGCA TTAGATTTGT TGTCAAAGAT GTTTACCTAT GATCCCAAGT CTAGAATAAC GATTCAGCAG GCTCTACAAC ACAGGTACTT CACATCTGCA CCTTCGCCTA CTGACCCTTT AAAGCTCCCA AGACCAGTTC GCAAGCAGGA CGCTAAGTCA TCTGACAGTA AACACGAAGC TATTAAAGTG TTGTCACCAG CACATAAGCT TAGAAGAGTG ATGCCTGACC GAGGAAAGTC TGCTAATGGT TTCAAGGACC AGAGTGTTGA TGTCATGAGA CAAGCTAGCC ATGATGGACA AGCACCGATG TCTTTAGATT TCACCATCCT AGCCGAGCGG CCTCCTAACC GACCAACCAT CACCAGTGCG GATAGATCTC ATCTGAAGAG GAAACTCGAT CTCGAGTTCC TATAGGATAT AGCTTAACAG GCTTCTTCTT GACGTCGTTC TTCAGTTCCT ATAGCCTATA GGATCTCTCT TACTGGTTGG TTCCTGAAAT TTGTCATATT ACAACTAGTG ATGACGAATA GTGTGAATCA TTCTTTCTGT TTTCAATAAA ATATAAAGTA CAGATGATTA ACTAATCATC ATGTACACCC ATCATAGAAC AATCTATCTG TTTTTGGCCT ATGCTCAAAA GAGAGTTCTG ATCCCAAACT CATT 
Length1584
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15026231.. 15028608
Download Sequence
A.thaliana
AGI-codeAT1G73690.1
Descriptioncyclin-dependent kinase D1;1
TAIR curator summarycyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation.
Alias[AT;CDKD;1][CAK3AT][CDKD1;1][CYCLIN-DEPENDENT KINASE D1][cyclin-dependent kinase D1;1]
Gene coexpression
MR
MR Locus Description
20.2485 Ahg353421 RING/U-box superfamily protein
28.775 Ahg945757 Protein of unknown function (DUF793)
34.4093 Ahg486110 Cam interacting protein 111
39.4208 Ahg893705 disease resistance protein (TIR-NBS-LRR class)
46.7974 Ahg481650 dephospho-CoA kinase family
50.2593 Ahg314419 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases
51.7494 Ahg942018
58.66 Ahg319345
66.0757 Ahg471516 F-box/RNI-like superfamily protein
75.4983 Ahg477043 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression