Detail



ID : Ahg476912

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476912|fgenesh2_kg.2__2042__AT1G77480.1
Sequence
CAAAGAAACC TCTGTTGTAA GTTGCAAGAA ATTGTTGTGT GAGAGAGAGA GTCAGAGATA TATATAAACA AATATTCTAC AAAGAAAGGA GCCCTCCTTT TTGTTGCCCT GTGTCAAAAA AGAAACCTTT TTGGGGATTT GGTTTCGCTT TCTTGGGGCC AAAAAAAAAG GAGATGAATC CGAAACAGGA GACAAGAAAC CTTCACTTCT TCTTCTTAGT CTTCGTCTTC TATGTGTTCG TCCTCTGTGC TCGCTTTCAA CCCTCTGATG CTACTACCAA AGACTCGTCG GCTGGACAAG TGAAGTTACA GAATCGTCGA CTTGGCTCCT CCGTCGTGTT TCCTGTCTCC GGGAATGTGT ATCCTCTTGG GTACTATTAT GTGTTGCTTA ACATCGGCAA CCCACCTAAG CTCTTTGACT TGGACATTGA CACTGGCAGT GACCTCACTT GGGTTCAGTG TGATGCACCC TGCAACGGTT GCACAAAGCC TCGTGCTAAG CAGTACAAGC CCAATCACAA CACTTTGCCT TGTTCACACC ACTTGTGTTC TGGCCTCGAC CTTACCCAAA ATAGACCTTG TGATGACCCT GAGGATCAAT GTGACTATGA AATCGGATAC TCCGATCATG CATCATCTAT TGGTGCACTT GTAACTGATG AGTTTCCTCT AAAACTCGCA AATGGCTCCA TTATGAATCC TCATTTGACA TTTGGATGTG GGTATGATCA GCAGAATCCT GGTCCACACC CTCCTCCTCC AACAGCGGGA ATACTTGGCC TTGGAAGAGG GAAAGTAGGC ATCTCAACTC AGCTTAAGTC CTTGGGGATA ACGAAGAATG TGATTGTGCA TTGCTTAAGT CATACTGGTA AAGGCTTTCT CTCTATTGGA GATGAGCTTG TTCCTTCTTC TGGAGTTACA TGGAATTCAT TGGCTACTAA TTCAGCTAGT AAAAACTACA TGACTGGACC AGCAGAGCTT CTCTTTAACG ACAAGACCAC AGGTGTCAAA GGCATTAACG TAGTTTTTGA TAGTGGAAGC TCGTACACTT ACTTCAACGC CGAAGCATAC CAAGCGATTC TCGATCTTAT AAGAAAAGAC TTGAATGGGA AGCCTTTGAC GGAGACAAAA GATGATAAAA GCTTACCGGT CTGCTGGAAA GGTAAAAAAC CTTTGAAATC ACTTGATGAG GTCAAGAAAT ACTTCAAGAC TATTACTTTA CGATTTGGGT ATCAAAAGAA TGGTCAGCTA TTTCAGGTTC CACCTGAGTC GTGTCTCATT ATCACTGAAA AAGGAAATGT ATGTTTGGGT ATTCTGAACG GAACTGAAGT CGGGCTCAAC AGCTACAATA TCATTGGAGA CATATCTTTC CAAGGGATAA TGGTGATCTA TGACAATGAG AAGCAGAGGA TTGGATGGAT TTCTTCAGAC TGTGACAAAC TTCCCAATGT GAATCACGAC TATGAAGGAG ATCTGTCGGA GGAAGCTTAT CCAATAGGAT TTGGTTTGAT AAAAGAGCTT TTCTCAGGAA GTGATTCTTC TAAGAACAAG AACTTGGTCT CTGATGGAGA GCTTTGACAC ATGAGGTTTT TGGTTTTGTT GTTATCATAG AAACAAGGAA ATCTTTTGTG AATATATATA T 
Length1641
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16657687.. 16660325
Download Sequence
A.thaliana
AGI-codeAT1G77480.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg474545 TATA binding protein associated factor 21kDa subunit
14.3178 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
18.3848 Ahg929675 nuclear RNA polymerase D2B
20.1494 Ahg493633 histidine kinase 2
30.5941 Ahg477150
34.641 Ahg478365 P-loop containing nucleoside triphosphate hydrolases superfamily protein
34.9714 Ahg480836 H(+)-ATPase 1
36.1663 Ahg933590 photosystem II subunit P-2
38.7427 Ahg488484 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
39.2301 Ahg906549 glutamate receptor 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression