Detail



ID : Ahg476923

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476923|fgenesh2_kg.2__2053__AT1G77590.1
Sequence
ATGATTCCTT ATGCAGCTGG TGTTATTGTG CCTTTGGCTT TAACCTTCTG GGTTCAGAAA TCTAAGAAAG AAAAGAAAAG AGGTGTTGTT GTTGATGTTG GTGGTGAACC AGGTTATGCC ATTAGGAATC ACAGGTTTAC TGATCCTGTT AGTTCCCATT GGGAACATAT CTCAACGCTT CCAGAGCTCT TTGAGATTTC TTGTAATGCT CACAGCGATA GGGTTTTCCT TGGAACCCGA AAGCTCATCT CTAGAGAGAT TGAGACTAGT GAGGATGGAA AAACTTTTGA GAAACTTCAT TTGGGTGACT ACGAGTGGCT TACTTTTGGG AAGACACTCG AAGCTGTGTG TGATTTTGCC TCTGGGCTGG TTCAGATTGG ACACAAGACA GAAGAACGTG TCGCCATTTT TGCAGATACT AGAGAAGAAT GGTTCATCTC CCTACAGGGT TGCTTCAGGC GAAATGTCAC TGTGGTAACT ATCTATTCAT CTTTGGGAGA GGAAGCTCTT TGTCACTCTC TGAATGAGAC AGAGGTCACA ACCGTAATAT GTGGTAGCAA AGAACTCAAA AAGCTCATGG ACATAGGCCA ACAGCTTGAA ACTGTTAAAC GTGTGATATG CATGGATGAT GAATTCCCAT CTGATGTGAA CAGTAATTGG ATGGCGACTT CATTTACTGA TGTTCAGAAA CTTGGCCGCG AAAACCCTGT AGACCCTAAT TTTCCTCTCT CAGCAGACGT TGCTGTTATA ATGTACACCA GTGGAAGCAC TGGACTTCCC AAGGGTGTTA TGATGACGCA TGGTAATGTC CTAGCTACAG TTTCGGCAGT GATGACAATT GTTCCAGACC TTGGAAAGAG GGATATATAC ATGGCATATT TACCTTTGGC TCACATCCTT GAGTTAGCAG CTGAGAGCGT AATGGCTACT ATTGGGAGTG CTATTGGATA TGGGTCTCCC TTGACGCTCA CGGATACTTC AAACAAGATA AAAAAGGGTA CAAAAGGAGA TGTCACGGCA CTAAAGCCCA CCATAATGAC AGCTGTTCCA GCCATTCTTG ATCGTGTCCG GGATGGTGTC CGCAAAAAGG TTGATGCTAA GGGCGGATTG TCAAAGAAAT TGTTTGACTT TGCATATGCT CGGCGATTAT CTGCAATCAA TGGAAGTTGG TTTGGAGCCT GGGGATTGGA AAAGCTTCTG TGGGACGTGC TTGTGTTCAG GAAAATCCGT GCAGTATTGG GAGGTCAAAT CCGCTACTTG CTCTCTGGTG GTGCCCCTCT TTCTGGTGAT ACTCAGAGAT TCATTAACAT ATGCGTTGGG GCTCCAATCG GTCAGGGATA TGGGCTCACA GAGACTTGTG CTGGTGGAAC CTTCTCGGAG TTTGAGGACA CATCCGTTGG CCGTGTTGGT GCGCCACTTC CTTGCTCCTT TGTTAAGCTA GTAGACTGGG CGGAAGGTGG GTATCTAACC AGTGATAAGC CAATGCCCCG TGGTGAAATT GTAATTGGTG GCTCAAATAT CACGCTTGGG TATTTCAAAA ATGAGGAGAA AACTAAAGAA GTGTACAAGG TTGATGAAAA GGGGATGAGG TGGTTCTACA CAGGAGACAT AGGACGATTT CACCCTGATG GCTGCCTCGA GATAATAGAC CGAAAAAAGG ATATCGTTAA ACTTCAGCAC GGAGAATATG TCTCCTTGGG CAAAGTTGAA GCTGCTCTCA GTATAAGTCC ATATGTTGAA AACATAATGG TTCATGCTGA TTCATTCTAC AGTTACTGTG TGGCTCTTGT GGTCGCGTCC CAACATACAG TTGAAGGTTG GGCTTCAAAG CAAGGAATAG ACTTTGCCAA CTTTGAAGAA CTGTGCGCGA AAGAACAAGC CGTGAAAGAA GTGTATGCGT CTCTTGTCAA GGCGGCTAAA CAATCACGAT TGGAGAAGTT TGAGATACCA GCAAAGATAA AATTGTTGGC ATCTCCATGG ACGCCAGAGT CGGGCTTAGT CACAGCAGCT CTAAAGCTTA AAAGGGATGT AATTAGGAGG GAATTCTCTG AAGAGCTCAC CAAGTTATAT GCCTAAACTT TTCTTCTTCC TCTACTTTGT TTTTTTAAAG ACACAACAGA TGCACAAACT TAATTCTAAG AATATATGTC TTTTCGTGTA ATTTGTGTGG GAACTGTGAC GAGACAGAAA AAATTTAGGC TTTGGGACTC TGAAGTCTAT GCAGCTTAAT GGGCCTTTAT CAAACC 
Length2246
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16697844.. 16701304
Download Sequence
A.thaliana
AGI-codeAT1G77590.1
Descriptionlong chain acyl-CoA synthetase 9
TAIR curator summaryEncodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.
Alias[LACS9][long chain acyl-CoA synthetase 9]
Gene coexpression
MR
MR Locus Description
12.49 Ahg924525 6-phosphogluconate dehydrogenase family protein
15.0997 Ahg938234 nuclear factor Y, subunit B10
17.8606 Ahg491000 beta-galactosidase 3
23.622 Ahg485156 L-galactono-1,4-lactone dehydrogenase
24.4949 Ahg945736 Leucine-rich repeat protein kinase family protein
25.923 Ahg312889 gamma carbonic anhydrase 1
30.2985 Ahg480759 RNA-binding (RRM/RBD/RNP motifs) family protein
31.4006 Ahg490316 UDP-xylosyltransferase 2
31.6702 Ahg493822 6-phosphogluconate dehydrogenase family protein
32.4037 Ahg488566 UDP-glucosyl transferase 78D3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression