Detail



ID : Ahg480759

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480759|fgenesh2_kg.3__3460__AT2G18510.1
Sequence
TAACTTCTAG AAAAATCGCC AGAAGTGACG AAATTGAAAA CCTCAGATTT CTCAATCGGC GACGGAGTAA CGAAACAAAG AGAAGAAGAA GATGACGACT CGAATCGCTC CTGGTGTTGG AGCTAATCTT CTCGGCCAAC ACTCCGCTGA GAGGAACCAA GACGCCACTG TTTACGTCGG CAATCTCGAT GCTCAGCTTT CTGAAGAATT GCTTTGGGAA TTGTTCGTTC AAGCTGGTCC TGTTGTTAAT GTCTATGTTC CGAAAGATAG AGTGACAAAT CTTCATCAGA ACTATGGATT CATTGAATAT CGTAGTGAGG AAGATGCTGA TTATGCGATT AAGGTTCTCA ACATGATTAA GGTACATGGG AAGCCTATAC GTGTTAACAA GGCATCTCAA GATAAGAAAA GCTTGGATGT TGGTGCTAAC CTTTTCATTG GGAACCTTGA CCCTGATGTG GATGAGAAGC TCTTGTATGA TACTTTCAGT GCATTTGGTG TGATTGCTTC TAATCCTAAG ATAATGAGAG ATCCCGATAC TGGAAACTCA CGAGGTTTTG GTTTCATCAG CTATGACTCC TTTGAGGCAT CTGATGCGGC TATCGAGGCA ATGACTGGAC AATATCTCAG TAATCGTCAA ATAACAGTCT CTTACGCATA CAAGAAAGAC ACCAAAGGAG AGCGCCATGG TACTCCAGCA GAGAGGCTTT TGGCAGCCAC AAATCCAGCT GCCCAGAAAA GCAGACCCCA TACGCTATTC GCAAGTGGCC CTCCATCCAA TGCTCCTCAA GTTAATGGTC TACCACGTCC GTTTGCTAAC GGCAGCATGC AACCTGTCCC GATCCCAGCC CCCCGTCAAC CACCACCACC ACCTCCACAA GTATATCAAA CTCAGCCACC ATCCTGGCCA TCTCAGCCAC AACAACAGGG CTTTGTCCCA CCGCCCATGC AATTCCGTCC GCCTCAAGGT ATGCCTCCGC CACCACCTCC TCAGTTTCTA AATCACCAAC AAGGTTTCGG TGGTCCGAGG CCGCCGCCAC CACCTCAAGC CATGGGAATG CACCAACATG GAGGATGGCC ACCGCAACAC ATGCAGCAGC AAGGTGGACC ACCACAACAA CAACAACCAC CACCATACCA ACACCATCAC ATGTCTATGC CTCCACCACC ACCACACCAA GGTTGATAGT AATCATCTCT TCAGTCTCGA ACCAAATCAA CTATTTGTAA ACCCTTTCTT TCATGACAAG TAATCACAAG GATTTTGCCT TTTAGATTCA ATGAAACCTT AGGGAGAGAG AGAGAGAGAG AGAGAGAAAA AACACAATTA ATATTCCCTA TTGTCTTGTC TGCAGAGAAT CTCTTATCTT CGGTTTAGAG AGAGAGAGAG AGAGCGTAGA AATTAGTGCC AATGTGTGTC TGGTTTTTAG TGATGTTATT TCTTGTTTGT GTTGCAGAAT CTCTGATGCC GTGTGCTTTA ATATTTACCA AAACTGTGCT GTAAAATCTC AATAATTTAA CTTCTGACCT TTGAGGTTGC TTTTTACTCT 
Length1550
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21495964.. 21498391
Download Sequence
A.thaliana
AGI-codeAT2G18510.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[emb2444][embryo defective 2444]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg492815 small nuclear ribonucleoprotein associated protein B
8.7178 Ahg472969 U2 snRNP auxiliary factor small subunit, putative
9.32738 Ahg930498 heat shock protein 60
9.94987 Ahg473141 SecY protein transport family protein
12.2474 Ahg487063 hydroxyproline-rich glycoprotein family protein
12.3288 Ahg483630 structural constituent of nuclear pore
14.8997 Ahg482274 MOS4-associated complex 3B
16.0624 Ahg353700 DNA topoisomerase, type IA, core
18.3303 Ahg476596 NAP1-related protein 1
20.199 Ahg478805 Kinase-related protein of unknown function (DUF1296)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression