Detail



ID : Ahg477029

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477029|fgenesh2_kg.2__2159__AT1G78650.1
Sequence
AAAAACCTCC CAAATCTGAG AAATCGGAAA AGATGACTCA CACCGAAACC CTAAATATTC TCGATGAAAT CGAATCGCTT GTCTCCGATC AGCTTCAAGT GGTATCTTAC AAATGGTTGA GTCGAAATTT CTCGCTTTCA TCAAATACTG CCAAGAGGTT GCTCAAGGAT TTTGTAGAGA AACAAGGGAA GGGTTTGGAA GTTGTATATA TTGTGTCTGG GTTGCTAAAG AACGGACCTT CGAATTACCA CGCAAGGCTT GCTTCTAGCA CCGAACTTCC AGAAGTGGAG AAAGAGTTCA ATGGAAAATA TTCAGTACAT ATCTACAGTG TTCAAGCTAG TATTCCAATG GATCCAGCAG CCATATGGAA CACTGAGTTT GTGCAAGCAG AAGAACTCTT CAGGCAGCAT TCTGCCATTG ATAATTGCTT GAAAGGCAAC AGGTTTTGTG GCGTCTCCAA TTCTTGTGTA AAGCGCAATA TAGAGGGAAC CACTGAAAAT GTTACGGTCC CGCGAACTGA AATTGTGAGA ACTACAGGAC AATCTAAAAG TAGTTTAAAT TTTCAAAAGA GTACATTGCC GTCAAACCAG GGAAAGAATT TTCAGCACTC AAGCCCTAAT GTTGTCCATC AGGGTAAGAG TGAAACTACT GCTGCTCCAG CTAAAAATCA GTCTGCGAAA TCCTCTTTGG ATAAAGAAAA AGCTTTTCCT GTGCCCGCTA ATAAAAAGAA TGGACAGGGC GAAAAGAAGG TGACTGGAAC TGGTGGTTTG TTGAAAAATA TGTGGGGCCG TGTGCCTATG AAAACAGAAG ATGATACTCC AACAGTAGAG GTCAAAAATC ATAATACTGA TCATTCGGAA GCCGAAAAAC CTTCTCATGA TACCGACAAT AAAGGAGGCA GCGATGATGA GACTCGAGAT GTCAATTTCA TGAGAGCGCC TAAAAATGAT AACAGAAAAA GGAAGGTGAT ATTTGATTTT TCAGATGACG AGTATGAAGA TGTAATCAGC CTAGCATCTC CTAGTAGTCC AAAGGTTAAT TCACGTCCAG ATGTGGAACT CAGTTCCGAA GATTCAGGTC CAAAGAAGCC TGACGCAGAT CGAGAGATAA AATCTGAGGA ACCAGAGGTC AGCAAAGAAG ACAGGCAAAA ACCTGCTTCT ACGACTTTGT CAATGGAGAA GATCCAGGCC ATTGGTTCTG AAGCTAAAGT AAATCCCTCA AAGGGAAGAA CTACTGAAGT TTCTAGTTCA CCGAAAAGGA AAAAGGTGTT GAAGTCACGG ATTGATGATC GTGGGAGAGA AGTAACTGAG GTAGTGTGGG AGGAGACAGA AACGCTTCCT AAGAAGAAAG AGGACACTGA CACAAGTAAG AAGTTAAATG ATGGCAAAAG CGCAAATGCT GTTAACAGGG CGGTGGCGCA GAAGAAGAGT CCGGCCGTGG GAAACACAGC AGCCACAAAC GCAGGAGGAA AAGCAGGAAG CAAGAAAGGC GGAAACGCCA AAGATCCAAA GCAAGGGAAC ATAATGTCCT TCTTCAAGAA AGTTTAAAAA TGCTTTTTGT ATTTATTGTT TGCTATGTTT GATTGAGGAT ATATATCAAA ATCAGAACTT GGATTCATCT GACTGTATGT TTTGATCCAT TGTTTCTAAA AAAACACTTT TGAGCCGTTT CT 
Length1672
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17269533.. 17272230
Download Sequence
A.thaliana
AGI-codeAT1G78650.1
DescriptionDNA-directed DNA polymerases
TAIR curator summarySimilar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication.
Alias[POLD3]
Gene coexpression
MR
MR Locus Description
27.9106 Ahg908546 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
30.8058 Ahg496142 nuclear RNA polymerase C1
38.2361 Ahg928899 TCP-1/cpn60 chaperonin family protein
53.1507 Ahg474228 Nse4, component of Smc5/6 DNA repair complex
55.857 Ahg324433 O-acetylserine (thiol) lyase isoform C
56.4358 Ahg918538 folate transporter 1
57.55 Ahg322461 origin recognition complex subunit 4
59.925 Ahg359673 BRCT domain-containing DNA repair protein
63.0555 Ahg478461 Paxneb protein-related
64.0859 Ahg935788 sister-chromatid cohesion protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression