| Annotation |
|---|
| Description | jgi|Araly1|496142|fgenesh2_kg.8__1958__AT5G60040.1 |
| Sequence |
ACTTAGCTCT GCTGCTTCTT CTTAAACCTA AACCCACCTT TTTCACCCTC TTCTTTTTTG CAGCTTTGAT TGGAGGAGAT GGAGACGAAG ATGGAAATCG AATTCACTAA ACAACCCTAC ATCGAAGATG TTGGTCCTCT TAAAATAAAA AGCATAAACT TCTCTGTGCT TTCTGACCTT GAGATCATGA AAGCTGCTGA AGTTCAAGTC TGGAAGAATA ATTACTACGA GACCAATCTT AAACCCTATG AAAACGGCTT GTTGGATGCT CGAATGGGTC CTCCAAACAA AAAGTCTATA TGCACAACCT GTGACGGAAA CTTCCAAAAT TGTCCGGGAC ACTATGGATA TCTGAAGCTT GACCTCCCAG TTTACAACGT TGGATTCTTC AATTTTATCC TTGACATTTT GAAGTGCATT TGTAAGCGCT GTTCCAACAT GCTTTTAGAT GAGAAATTGT ATGAAGATCA CTTAAGGAAG ATGCGGAATC CCAAAATGGA GCCATTGAAG AAGACTGAAT TGGCGAAAGC GGTTGTCAAG AAGTGCAGTA CGATGGCAAG CCAGAGAATT ATAACGTGCA AAAAATGTGG CTACCTGAAT GGCATGGTAA AAAAGATTGC AGCGCAGATG GGTATAGGCA TCAGTCATGA CCGATCTAAA ATCCATGGTG GAGAGGTTGA TGAATGTAAA TCTGCAATAT CCCACACAAA GGAGTCTACT AGAGCAATAA ATCCTCTTAC GTATGTTCTT GATCCTAACT TGGTGCTCGG GCTTTTTAAA GGAATGAGTG ACAAGGACTG TGAACTTCTT TATATTGCCC ATAGACCTGA GAATCTTATC ACAATGTGCA TGCTTGTGCC ACCTTTATCC ATCCGACCGT CTGTTATGAT TGGTGGTACT CGAAGCAATG AAAACGACAT AACAGAGCGA TTAAAGCTAA TCATTCAAAA CAATGCTTGT CTTCATAGAA TTTTAAGTCA ACCTACCACA TCGCCCAAAA ACATGCAAGT ATGGGATACA GTTCAAAGCG AGGTTGCAAA ATACATTAAC AGTGAAGTCC GTGGTGTACA AAACCAGCCA GAGAAAACAC CACTGAGTGG ACTTCTTCAG CGTCTTAAAG GAAAACAGGG ACGTTTCCGT GCAAACTTGT CGGGGAAGCG TGTCGAGTAC ACTGGTAGAA CTGTTATTTC ACCTGATCCC AATCTGAAAA TTACAGAGGT AGGAATTCCC ATCCTTATGG CTCGGATCTT AACTTTTCCT GAATGTGTTT CCCGTCATAA TATTGAGAAG TTGAGGCAAT GTGTCCGTAA TGGCCCTAAT AAATACCCTG GTGCCAGAAA TGTCAGATAT CCAGATGGTT CTTCAAGGAC TTTGGTTGGT GATTATCGTA AGCGTATTGC TGATGAACTG ACCATTGGCT GCATAGTTGA CCGCCATTTA GAAGAAGGGG ATGCTGTTCT TTTTAACAGG CAACCGAGTC TGCATCGGAT GTCTATCATG TGTCACAGGG CAAGAATAAT GCCTTGGAGA ACATTGAGGT TCAACGAATC GGTTTGTAAC CCATATAATG CTGATTTTGA TGGTGATGAG ATGAACATGC ACGTACCACA AACAGAGGAG GCTCGGACAG AGGCTATTAC ATTGATGGGG GTACAAAACA ATTTGTGCAC CCCAAAAAAT GGAGAAATTT TAGTAGCATC AACGCAGGAC TTTTTGACAA CTTCCTTTTT GATAACGAGG AAGGACACAT TTTATGACCG TGCAGCCTTT TCACTTATAT GTTCTTACAT GGGAGATGGC ATGGATGCCA TAGATTTGCC CACACCCACA ATCATTAAGC CAATAGAGCT TTGGACTGGT AAACAGCTTT TTAGTGTTTT GCTGCGTCCA AATGCAAGTG TTAGAGTCTA CGTAACTCTT AATGTGAAAG AGAAGAACTT CAAGAAGGGA GAGCATGGTT TCGATGAAAC AATGTGCGTA AATGATGGAT GGGTTTATTT TCGAAACAGT GAGCTAATAT CAGGACAATT GGGGAAGGCT ACGTTAGGAA ATGGAAACAA GGATGGATTA TATTCTATTC TTCTAAGAGA TTACAACTCC CATGCTGCTG CAGTCTGCAT GAATCGGCTA GCAAAATTGA GTGCTCGGTG GATTGGAATC CATGGCTTCT CCATTGGAAT TGATGACGTT CAACCTGGTG AAGAGTTGAA TAAGGAAAGA AAAGATAGCA TCCAGTTCGG ATATGACCAG TGCCATCGCA AAATTGAAGA ATTTAATCGA GGAAATTTGC AACTTAAAGC TGGTCTAGAT GGTGCAAAAT CATTAGAAGC TGAAATAACA GGGATTCTCA ATACAATTCG AGAAGCCACT GGGAAGGCAT GTATGAGCGG ATTACATTGG AGAAATAGTC CCTTGATCAT GTCACAATGT GGTTCCAAAG GATCTCCTAT CAATATCAGT CAGATGGTCG CATGTGTTGG TCAGCAGACA GTTAATGGTC ACCGTGCTCC TGATGGATTT ATAGATCGAA GTCTTCCTCA TTTCCCTAGG ATGTCCAAAT CACCTGCAGC TAAAGGTTTT GTTGCTAATT CGTTCTACAG TGGTCTTACT GCCACAGAAT TTTTCTTTCA CACTATGGGT GGACGAGAAG GTCTAGTTGA TACAGCGGTG AAAACTGCAA GTACAGGTTA CATGTCTCGT AGACTGATGA AAGCTTTGGA GGATCTATTA GTCCATTATG ATAACACAGT GCGAAATGCC AGCGGATGTA TACTTCAATT TACTTATGGG GATGATGGAA TGGACCCAGC ACTAATGGAA GGAAAGGATG GAGCTCCTTT AAATTTTGAT AGATTATTTC TGAAAATTCA GGCCACATGT CCTCCTCGAT CTCACCACAA TTATCTTTCC TCAGAAGAGT TGTCGCAAAA GTTTGAAGAG GAATTAGTCA GACATGATAA AAGTCGGGTT TGCACTGACG CCTTTGTGAA ATCTCTTCGA GAATTTGTTT CCTTGCTCGG AGTAAAGTCT GCAAGCACGC CTCAGGTTTT ATATAAAGCA TCTGGTGTGA CTGATAAGCA ACTCGAGGTA TTTGTAAAAA TTTGTGTATC TCGCTATCGG GAAAAAAAAA TTGAGGCTGG GACTGCAATT GGAACAATAG GAGCTCAGAG TATTGGAGAA CCTGGGACAC AAATGACTCT GAAAACTTTT CACTTTGCTG GAGTGGCGAG CATGAATATC ACACAAGGAG TCCCCCGAAT CAATGAAATC ATCAATGCTT CTAAAAATAT AAGCACACCT GTCATCTCTG CAGAACTTGA GAACCCCCTG GAATTGACTA GTGCGCGATG GGTGAAAGGA CGCATTGAAA AAACTACTTT AGGACAGGTT GCTGAGAGTA TCGAGGTGCT AATGACTTCA ACATCAGCGT CAGTGAGAAT AATTCTTGAC AAAAAAATAA TCGAGGAGGC ATGTTTGTCT ATAAGCCCCT GGTCGGTAAA AAATTCCATC CTAAAGACCC CCAGAATCAA ACTGAACGAT AATGATATTA GGGTTTTAGA TACGGGATTG GATATTACTC CTGTGGTGGA TAAAAGTAGG ACTCATTTCA ATCTCCACAA TCTGAAGAAT GTGCTGCCAA ATATCATAGT GAATGGGATC AAAACAGTTG AGCGAGTTGT TGTCGCAGAG GATATGGATA AAAATAAACA GATAGATGGG AAGACAAGGT GGAAACTGTT TGTGGAGGGC ACAAACCTCC TGGCTGTTAT GGGGACACCG GGAATCAATG GGAGAACTAC TACAAGTAAC AATGTTGTCG AAGTGAGCAA AACACTTGGA ATCGAGGCTG CAAGGACAAC AATTATTGAT GAAATAGGGA CAGTTATGGG AAACCATGGT ATGAGTATAG ACATCCGTCA CATGATGCTT TTGGCTGATG TCATGACTTA CAGGGGGGAG GTTCTCGGGA TACAAAGAAC TGGGATTCAG AAGATGGACA AAAGTGTGCT GATGCAGGCA TCTTTTGAGA GGACTGGAGA TCATTTATTT AGTGCAGCTA TTAGCGGAAA GGTTGATAAC ATAGAGGGAG TTACAGAATG TGTGATTATG GGCATACCAA TGAAGCTCGG AACCGGAATA CTCAAAGTTC TCCAAAGGAC CGATGATCTG CCCAAGTTGA AATATGGAGC TGATCCAATC ATCTCTTGAA AAGACAGAAA CAAAGTTTCA CGTGCCGAAT ATATAGAGAT GACAAGCAAC GCAAGATCAG TGCAGATGAA ACCAATTCTT GGATTCTAAT TCCACCTCCC AATATGCATA CTAACGGCTA AGCAAAGGCC GAGTGACAAT CTACCAATTT CGATAGCCCC GTATAGGATT CTGCAGCATA CTTTAGACTC AAACTCGGAT TTTCTTTTTG GTCTACAAAG GGGAAAGATT GTTTGCCCCG AGTTTATTTT CTTCTTTCTG TTCTGATCAT TGTTTTAGAC GATATATATC TTTTGAATCT TGGTATCCCA TTGAAATTGA TTAGTAACAG TTTATCAAAG GAAAGAAAAC AAAGATTTG |
| Length | 4569 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18177708.. 18187787 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G60040.2 |
| Description | nuclear RNA polymerase C1 |
| TAIR curator summary | Encodes a subunit of RNA polymerase III (aka RNA polymerase C). |
| Alias | [NRPC1][nuclear RNA polymerase C1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg491436 | La protein 1 |
| 3 |
Ahg330455 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 3.31662 |
Ahg950851 | DEA(D/H)-box RNA helicase family protein |
| 3.4641 |
Ahg483227 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related |
| 3.87298 |
Ahg476107 | senescence associated gene 24 |
| 4.79583 |
Ahg353720 | ARM repeat superfamily protein |
| 5.65685 |
Ahg347545 | |
| 5.74456 |
Ahg919093 | eukaryotic translation initiation factor 2 gamma subunit |
| 6.48074 |
Ahg488768 | TCP-1/cpn60 chaperonin family protein |
| 7 |
Ahg339800 | Tetratricopeptide repeat (TPR)-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|